BUSCO Gene Details in Cyphastrea salae

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Cyphastrea salaeBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 95.3% [S: 69.6%, D: 25.7%] F: 3.0%, M: 1.7%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,051 (95.3%)2,229 (69.6%)822 (25.7%)97 (3.0%)55 (1.7%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Cyphastrea salae: 4,072 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3527at6073Complete1161.7698.0ENSOFVP00000005151.1short transient receptor potential channel 4-associated proteinJBrowse
3561at6073Complete646.6387.0ENSOFVP00000025642.1spermatogenesis-associated protein 48JBrowse
3570at6073Complete335.8174.0ENSOFVP00000017275.1ras-related protein Rab-13 isoform X1JBrowse
3576at6073Duplicated656.8340.0ENSOFVP00000027308.1Ornithine carbamoyltransferase, mitochondrialJBrowse
3576at6073Duplicated650.4337.0ENSOFVP00000027299.1Ornithine carbamoyltransferase, mitochondrialJBrowse
3582at6073Complete959.5425.0ENSOFVP00000029101.1AP-2 complex subunit muJBrowse
3598at6073Complete609.6255.0ENSOFVP00000004633.1E3 ubiquitin-protein ligase SIAH1JBrowse
3641at6073Complete262.8168.0ENSOFVP00000011417.139S ribosomal protein L18, mitochondrial-likeJBrowse
3663at6073Fragmented1153.1630.0ENSOFVP00000010306.1Peripheral plasma membrane CASKJBrowse
3682at6073Complete484.0301.0ENSOFVP00000019546.1metaxin-1JBrowse
3691at6073Complete685.8372.0ENSOFVP00000035514.1Soluble calcium-activated nucleotidase 1JBrowse
3702at6073Complete262.7177.0ENSOFVP00000010489.1Eukaryotic translation elongation factor 1 epsilon-1JBrowse
3707at6073Complete396.0272.0ENSOFVP00000015199.1protein rogdi homologJBrowse
3738at6073Complete731.4400.0ENSOFVP00000027268.1E3 ubiquitin-protein ligase pellino homolog 1JBrowse
3752at6073Complete192.585.0ENSOFVP00000037417.1ubiquitin-fold modifier 1JBrowse
3768at6073Duplicated1304.6639.0ENSOFVP00000035254.1glycogen JBrowse
3768at6073Duplicated1281.8639.0ENSOFVP00000035245.1glycogen JBrowse
3797at6073Complete553.7316.0ENSOFVP00000018559.1mitochondrial thiamine pyrophosphate carrier-likeJBrowse
3805at6073Complete645.3374.0ENSOFVP00000022197.1nucleic acid dioxygenase ALKBH1-likeJBrowse
3818at6073Duplicated858.7468.0ENSOFVP00000029956.1F-box/LRR-repeat protein 20JBrowse
Go to page: of 204 pages
TOP