BUSCO Gene Details in Hydractinia echinata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydractinia echinataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 92.2% [S: 34.9%, D: 57.2%] F: 4.8%, M: 3.1%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,952 (92.2%)1,119 (34.9%)1,833 (57.2%)152 (4.8%)99 (3.1%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydractinia echinata: 6,262 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2305at6073Duplicated389.2209.0ENSDJXP00000001687.1vacuolar-sorting protein SNF8JBrowse
2305at6073Duplicated388.1207.0ENSDJXP00000004922.1vacuolar-sorting protein SNF8JBrowse
2305at6073Duplicated386.4207.0ENSDJXP00000001669.1vacuolar-sorting protein SNF8JBrowse
2333at6073Duplicated657.0414.0ENSDJXP00000036774.1carbohydrate sulfotransferase 1JBrowse
2333at6073Duplicated655.8413.0ENSDJXP00000053892.1carbohydrate sulfotransferase 1JBrowse
2333at6073Duplicated653.8387.0ENSDJXP00000053889.1carbohydrate sulfotransferase 1JBrowse
2340at6073Duplicated622.1366.0ENSDJXP00000012247.1Endoplasmic reticulum-Golgi intermediate compartment protein 2JBrowse
2340at6073Duplicated622.1366.0ENSDJXP00000012251.1Endoplasmic reticulum-Golgi intermediate compartment protein 2JBrowse
2340at6073Duplicated622.1366.0ENSDJXP00000012256.1Endoplasmic reticulum-Golgi intermediate compartment protein 2JBrowse
2340at6073Duplicated619.6362.0ENSDJXP00000012240.1Endoplasmic reticulum-Golgi intermediate compartment protein 2JBrowse
2378at6073Duplicated219.7104.0ENSDJXP00000017514.1RING-box protein 1JBrowse
2378at6073Duplicated219.7104.0ENSDJXP00000017517.1RING-box protein 1JBrowse
2378at6073Duplicated219.7104.0ENSDJXP00000017520.1RING-box protein 1JBrowse
2378at6073Duplicated219.7104.0ENSDJXP00000017529.1RING-box protein 1JBrowse
2385at6073Duplicated299.8269.0ENSDJXP00000038455.1polyhomeotic-like protein 2JBrowse
2385at6073Duplicated265.8242.0ENSDJXP00000038448.1polyhomeotic-like protein 2JBrowse
2419at6073Duplicated191.0122.0ENSDJXP00000022358.1nuclear transport factor 2JBrowse
2419at6073Duplicated191.0122.0ENSDJXP00000053713.1nuclear transport factor 2JBrowse
2440at6073Complete328.5233.0ENSDJXP00000026690.1uncharacterized protein LOC116287038JBrowse
2456at6073Duplicated222.6186.0ENSDJXP00000033911.1transmembrane protein 267-likeJBrowse
Go to page: of 314 pages
TOP