BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
4507at6073Complete461.5266.0pspe_0.1.m1.23711.m1Armadillo repeat-containing protein 1JBrowse
4640at6073Complete241.3143.0pspe_0.1.m1.18701.m1MORN repeat-containing protein 2JBrowse
4644at6073Fragmented717.9308.0pspe_0.1.m1.65203.m1DNA-binding protein RFX6-likeJBrowse
4679at6073Complete306.1140.0pspe_0.1.m1.6905.m1large ribosomal subunit protein uL14JBrowse
4693at6073Complete932.3507.0pspe_0.1.m1.66677.m1frizzled-5JBrowse
4720at6073Complete227.5135.0pspe_0.1.m1.20859.m1Zinc finger SWIM domain-containing protein 7JBrowse
4751at6073Complete2596.21581.0pspe_0.1.m1.39174.m1laminin subunit gamma-1JBrowse
4789at6073Complete495.7346.0pspe_0.1.m1.46122.m1nucleoporin NUP35-likeJBrowse
4800at6073Fragmented237.3151.0pspe_0.1.m1.31681.m1testis-expressed protein 47JBrowse
4808at6073Complete545.1347.0pspe_0.1.m1.51691.m1P2X receptorJBrowse
4816at6073Complete601.4338.0pspe_0.1.m1.5268.m1tetratricopeptide repeat protein 17JBrowse
4848at6073Fragmented311.4186.0pspe_0.1.m1.49578.m1F-actin-capping proteinJBrowse
4849at6073Complete346.2197.0pspe_0.1.m1.64234.m1synaptogyrin-2-likeJBrowse
4875at6073Complete414.6251.0pspe_0.1.m1.58666.m1mediator of RNA polymerase II transcription subunit 6JBrowse
4886at6073Complete419.2231.0pspe_0.1.m1.58814.m1exosome complex component rrp40JBrowse
4889at6073Complete403.4185.0pspe_0.1.m1.35231.m1GTP-binding protein SAR1b-likeJBrowse
4895at6073Complete209.8117.0pspe_0.1.m1.53013.m1proteasome maturation protein-likeJBrowse
4908at6073Complete456.1292.0pspe_0.1.m1.24835.m1lysophosphatidylserine lipase ABHD12-likeJBrowse
4922at6073Complete728.3367.0pspe_0.1.m1.14694.m1serine/threonine-protein kinase 32B-likeJBrowse
4936at6073Complete418.9193.0pspe_0.1.m1.45582.m1ATP-dependent Clp protease proteolytic subunit-likeJBrowse
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