BUSCO Gene Details in Paramuricea clavata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Paramuricea clavataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 78.5% [S: 64.6%, D: 13.9%] F: 17.4%, M: 4.1%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,513 (78.5%)2,069 (64.6%)444 (13.9%)558 (17.4%)132 (4.1%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Paramuricea clavata: 3,572 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
4117at6073Complete418.5206.0CAB3998815.1ras-related protein Rab-5B-likeJBrowse
4122at6073Complete355.8179.0CAB4032183.1Trafficking protein particle complex subunit 3JBrowse
4148at6073Complete663.0472.0CAB3989410.1sphingosine kinase 2-likeJBrowse
4192at6073Complete835.9605.0CAB4005183.1Prolyl 3-hydroxylase 2JBrowse
4196at6073Complete1137.4687.0CAB4025061.1NHL repeat-containing protein 2JBrowse
4204at6073Complete633.2380.0CAB3996973.1ethanolaminephosphotransferase 1JBrowse
4265at6073Complete629.5414.0CAB3989569.1tRNA (guanine(10)-N2)-methyltransferaseJBrowse
4273at6073Complete776.3716.0CAB3981440.1uncharacterized protein LOC124453041 isoform X1JBrowse
4317at6073Duplicated2353.71150.0CAB4010272.1methionine synthaseJBrowse
4317at6073Duplicated2313.41126.0CAB4010273.1methionine synthaseJBrowse
4319at6073Complete695.7446.0CAB3991119.1meiosis-specific with OB domain-containing proteinJBrowse
4355at6073Duplicated829.7429.0CAB3981101.1actin-like protein 6BJBrowse
4355at6073Duplicated747.4389.0CAB3981102.1actin-like protein 6BJBrowse
4370at6073Complete374.9217.0CAB4012338.1exosome complex component RRP46-likeJBrowse
4400at6073Complete764.6404.0CAB4013503.1COP9 signalosome complex subunit 4JBrowse
4403at6073Complete1228.7595.0CAB3983426.1electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrialJBrowse
4413at6073Fragmented182.1126.0CAB4042142.1ADP-ribose glycohydrolase ARH3-likeJBrowse
4441at6073Complete810.5420.0CAB4002942.1multifunctional protein ADE2-likeJBrowse
4489at6073Complete650.1337.0CAB3996419.1Cytohesin-1JBrowse
4507at6073Complete431.3266.0CAB4011842.1Armadillo repeat-containing protein 1JBrowse
Go to page: of 179 pages
TOP