BUSCO Gene Details in Porites lutea

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Porites luteaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 98.9% [S: 78.3%, D: 20.6%] F: 0.4%, M: 0.7%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,168 (98.9%)2,509 (78.3%)659 (20.6%)13 (0.4%)22 (0.7%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Porites lutea: 4,225 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3526at6073Complete215.6105.0XP_073241200.160S ribosomal protein L44JBrowse
3527at6073Duplicated1167.2698.0XP_073234137.1short transient receptor potential channel 4-associated proteinJBrowse
3527at6073Duplicated1166.2698.0XP_073234136.1short transient receptor potential channel 4-associated proteinJBrowse
3559at6073Duplicated913.0434.0XP_073256329.1putative ATP-dependent RNA helicase ddx6JBrowse
3559at6073Duplicated834.7434.0XP_073256330.1putative ATP-dependent RNA helicase ddx6JBrowse
3561at6073Complete697.8387.0XP_073236733.1spermatogenesis-associated protein 48JBrowse
3570at6073Complete342.9181.0XP_073240992.1ras-related protein Rab-13 isoform X1JBrowse
3576at6073Complete665.5344.0XP_073256279.1Ornithine carbamoyltransferase, mitochondrialJBrowse
3582at6073Complete994.5438.0XP_073250649.1AP-2 complex subunit muJBrowse
3598at6073Complete631.9276.0XP_073234718.1E3 ubiquitin-protein ligase SIAH1JBrowse
3641at6073Complete286.4183.0XP_073256800.139S ribosomal protein L18, mitochondrial-likeJBrowse
3663at6073Complete1642.7859.0XP_073255043.1Peripheral plasma membrane CASKJBrowse
3682at6073Duplicated506.6306.0XP_073243464.1metaxin-1JBrowse
3682at6073Duplicated500.8306.0XP_073243463.1metaxin-1JBrowse
3691at6073Complete687.5374.0XP_073246647.1Soluble calcium-activated nucleotidase 1JBrowse
3702at6073Complete270.0177.0XP_073257345.1Eukaryotic translation elongation factor 1 epsilon-1JBrowse
3707at6073Complete489.7274.0XP_073258465.1protein rogdi homologJBrowse
3738at6073Duplicated728.5400.0XP_073247582.1E3 ubiquitin-protein ligase pellino homolog 1JBrowse
3738at6073Duplicated728.1400.0XP_073247580.1E3 ubiquitin-protein ligase pellino homolog 1JBrowse
3752at6073Complete192.285.0XP_073253143.1ubiquitin-fold modifier 1JBrowse
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