BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
73861at6073Complete1239.3629.0pspe_0.1.m1.36528.m1ATP-binding cassette sub-family B member 8, mitochondrialJBrowse
73865at6073Complete365.8193.0pspe_0.1.m1.58883.m1calcineurin B homologous protein 1JBrowse
73867at6073Complete603.0248.0pspe_0.1.m1.57088.m1Folate receptorJBrowse
73871at6073Complete715.3376.0pspe_0.1.m1.31315.m1Interleukin enhancer-binding factor 2JBrowse
73874at6073Complete1381.5718.0pspe_0.1.m1.21400.m1dipeptidyl peptidase 3JBrowse
73875at6073Complete149.5295.0pspe_0.1.m1.21760.m1UDP-galactose transporter senjuJBrowse
73880at6073Complete408.1214.0pspe_0.1.m1.13920.m1charged multivesicular body protein 3JBrowse
73889at6073Complete467.7262.0pspe_0.1.m1.47643.m1leucine-rich repeat-containing protein 73JBrowse
73893at6073Fragmented646.0342.0pspe_0.1.m1.19250.m1DNA polymerase alpha subunit BJBrowse
73894at6073Complete940.9549.0pspe_0.1.m1.36204.m1vacuolar protein sorting-associated protein 33BJBrowse
73896at6073Complete849.9460.0pspe_0.1.m1.24151.m1orotidine 5'-phosphate decarboxylaseJBrowse
73899at6073Complete432.2237.0pspe_0.1.m1.62438.m1derlin-2JBrowse
73901at6073Complete2171.21284.0pspe_0.1.m1.25318.m1ATP-dependent RNA helicase TDRD9JBrowse
73908at6073Complete747.0396.0pspe_0.1.m1.63598.m1coiled-coil domain-containing protein 105JBrowse
73909at6073Fragmented136.0110.0pspe_0.1.m1.44938.m1mesencephalic astrocyte-derived neurotrophic factor homologJBrowse
73911at6073Complete386.4209.0pspe_0.1.m1.53756.m1yrdC domain-containing protein, mitochondrial-likeJBrowse
73912at6073Complete571.0306.0pspe_0.1.m1.50944.m1LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF113A-likeJBrowse
73913at6073Fragmented687.6337.0pspe_0.1.m1.27212.m1leucine-rich repeat protein soc-2 homologJBrowse
73924at6073Complete2082.31202.0pspe_0.1.m1.34268.m1WD repeat-containing protein 11JBrowse
73927at6073Complete1331.0771.0pspe_0.1.m1.48494.m1cGMP-dependent 3',5'-cyclic phosphodiesteraseJBrowse
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