BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
73928at6073Complete401.9228.0pspe_0.1.m1.58057.m1Alpha-ketoglutarate-dependent dioxygenase alkB 6JBrowse
73931at6073Complete940.2462.0pspe_0.1.m1.58851.m1tubulin epsilon chain-likeJBrowse
73933at6073Complete796.3415.0pspe_0.1.m1.33228.m1Septin-7JBrowse
73936at6073Duplicated249.1120.0pspe_0.1.m1.53572.m140S ribosomal protein S26-likeJBrowse
73936at6073Duplicated243.3119.0pspe_0.1.m1.53560.m140S ribosomal protein S26-likeJBrowse
73936at6073Duplicated238.4119.0pspe_0.1.m1.53571.m140S ribosomal protein S26-likeJBrowse
73945at6073Complete840.5501.0pspe_0.1.m1.29944.m1methylcrotonoyl-CoA carboxylase beta chain, mitochondrialJBrowse
73952at6073Complete1124.8602.0pspe_0.1.m1.23126.m1transducin-like enhancer protein 1JBrowse
73955at6073Complete275.8163.0pspe_0.1.m1.62661.m150S ribosomal protein L16JBrowse
73956at6073Complete386.2206.0pspe_0.1.m1.66496.m1PRELI domain containing protein 3B-likeJBrowse
73957at6073Complete318.6191.0pspe_0.1.m1.32844.m1ras-related protein Rab-13JBrowse
73960at6073Fragmented476.0236.0pspe_0.1.m1.16708.m1KRR1 small subunit processome componentJBrowse
73964at6073Complete193.8114.0pspe_0.1.m1.34718.m1chromosome transmission fidelity protein 8 homologJBrowse
73966at6073Complete486.5292.0pspe_0.1.m1.53823.m1DNA-(apurinic or apyrimidinic site) endonucleaseJBrowse
73970at6073Complete576.9339.0pspe_0.1.m1.23857.m1guanine nucleotide-binding protein subunit beta-like proteinJBrowse
73975at6073Complete220.4127.0pspe_0.1.m1.38850.m1prefoldin subunit 6JBrowse
74004at6073Complete342.4217.0pspe_0.1.m1.14701.m1Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1JBrowse
74006at6073Complete994.3555.0pspe_0.1.m1.55301.m1negative elongation factor B-likeJBrowse
74007at6073Complete401.7237.0pspe_0.1.m1.35970.m16-phosphogluconolactonaseJBrowse
74009at6073Complete976.7574.0pspe_0.1.m1.6123.m1sec1 family domain-containing protein 2JBrowse
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