BUSCO Gene Details in Scolanthus callimorphus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Scolanthus callimorphusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 74.0% [S: 60.0%, D: 14.1%] F: 14.8%, M: 11.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,371 (74.0%)1,921 (60.0%)450 (14.1%)473 (14.8%)359 (11.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Scolanthus callimorphus: 3,303 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
73344at6073Duplicated1800.71109.0NY_Scal100_v1.46754.1alpha-mannosidase 2x-likeJBrowse
73348at6073Complete371.5203.0NY_Scal100_v1.23006.1sperm axonemal maintenance protein CFAP97D1-likeJBrowse
73352at6073Duplicated549.7342.0NY_Scal100_v1.43907.1Activator of 90 kDa heat shock protein ATPase 1JBrowse
73352at6073Duplicated547.2342.0NY_Scal100_v1.47437.1Activator of 90 kDa heat shock protein ATPase 1JBrowse
73353at6073Complete506.7239.0NY_Scal100_v1.15483.1rab-like protein 3JBrowse
73358at6073Complete709.1502.0NY_Scal100_v1.5594.1rho GTPase-activating protein 8JBrowse
73362at6073Complete544.1293.0NY_Scal100_v1.37807.1ER membrane complex subunit 2JBrowse
73375at6073Duplicated654.8407.0NY_Scal100_v1.27510.1uncharacterized protein LOC130655131 isoform X1JBrowse
73375at6073Duplicated618.5381.0NY_Scal100_v1.41507.1uncharacterized protein LOC130655131 isoform X1JBrowse
73377at6073Complete333.0196.0NY_Scal100_v1.34303.1Mediator of RNA polymerase II transcription subunit 18JBrowse
73380at6073Complete814.7460.0NY_Scal100_v1.24531.1limb region 1 protein homologJBrowse
73381at6073Complete155.095.0NY_Scal100_v1.22937.1Ragulator complex protein lamtor4JBrowse
73385at6073Fragmented419.4201.0NY_Scal100_v1.17299.1Small ribosomal subunit protein uS2JBrowse
73387at6073Complete407.5270.0NY_Scal100_v1.14856.1ceramide phosphoethanolamine synthase-likeJBrowse
73393at6073Fragmented690.8311.0NY_Scal100_v1.15642.1cytoplasmic polyadenylation element-binding protein 1JBrowse
73395at6073Complete1551.3948.0NY_Scal100_v1.19572.1VinculinJBrowse
73398at6073Complete2442.61301.0NY_Scal100_v1.24196.1Acyl-CoA dehydrogenase/oxidase, N-terminalJBrowse
73401at6073Complete505.3277.0NY_Scal100_v1.47907.1checkpoint protein HUS1JBrowse
73402at6073Complete703.1482.0NY_Scal100_v1.40402.1Sorting nexin-17JBrowse
73414at6073Fragmented1163.5617.0NY_Scal100_v1.47940.1DNA topoisomerase 2-alpha-likeJBrowse
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