BUSCO Gene Details in Scolanthus callimorphus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Scolanthus callimorphusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 74.0% [S: 60.0%, D: 14.1%] F: 14.8%, M: 11.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,371 (74.0%)1,921 (60.0%)450 (14.1%)473 (14.8%)359 (11.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Scolanthus callimorphus: 3,303 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
73416at6073Fragmented969.9597.0NY_Scal100_v1.26498.1sodium/calcium exchanger 3JBrowse
73418at6073Fragmented1226.3708.0NY_Scal100_v1.31374.1glutamate receptor ionotropic, NMDA 1JBrowse
73422at6073Complete279.9211.0NY_Scal100_v1.3324.1acyl-protein thioesteraseJBrowse
73430at6073Complete343.1249.0NY_Scal100_v1.24050.1HUWE1-associated protein modifying stress responsesJBrowse
73432at6073Complete514.6268.0NY_Scal100_v1.32139.1palmitoyltransferase ZDHHC3-likeJBrowse
73434at6073Complete1219.5666.0NY_Scal100_v1.49979.1muskelinJBrowse
73441at6073Complete480.3216.0NY_Scal100_v1.34012.1Ras-related protein Rab-11AJBrowse
73442at6073Complete566.8284.0NY_Scal100_v1.31952.12,4-dienoyl-CoA reductase JBrowse
73443at6073Complete630.6364.0NY_Scal100_v1.17483.1nitrogen permease regulator 2-like proteinJBrowse
73448at6073Complete1477.7833.0NY_Scal100_v1.48864.1serine/threonine-protein kinase/endoribonuclease IRE1-likeJBrowse
73449at6073Complete414.4331.0NY_Scal100_v1.34113.1uncharacterized protein LOC110056401JBrowse
73454at6073Fragmented596.6310.0NY_Scal100_v1.12117.1transcriptional adapter 2-beta-likeJBrowse
73466at6073Complete463.7257.0NY_Scal100_v1.12227.1carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1JBrowse
73467at6073Complete230.2131.0NY_Scal100_v1.23728.1keratinocyte-associated protein 2JBrowse
73470at6073Complete840.1419.0NY_Scal100_v1.51456.1Flotillin-2JBrowse
73476at6073Complete596.5394.0NY_Scal100_v1.28677.1sphingosine-1-phosphate phosphatase 2JBrowse
73477at6073Complete927.9501.0NY_Scal100_v1.4914.1pescadillo homologJBrowse
73483at6073Complete633.8353.0NY_Scal100_v1.4349.1phosphoribosyl pyrophosphate synthase-associated protein 2JBrowse
73487at6073Complete1207.3692.0NY_Scal100_v1.47409.1MAP/microtubule affinity-regulating kinase 3-likeJBrowse
73488at6073Complete431.4279.0NY_Scal100_v1.1458.1phytanoyl-CoA dioxygenase domain-containing protein 1JBrowse
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