BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74401at6073Complete756.2457.0pspe_0.1.m1.37609.m1dnaJ homolog subfamily C member 3JBrowse
74404at6073Complete368.4199.0pspe_0.1.m1.35867.m1COMM domain-containing protein 2JBrowse
74407at6073Complete389.3238.0pspe_0.1.m1.15056.m1protein quaking-likeJBrowse
74414at6073Complete787.5425.0pspe_0.1.m1.62172.m1protein phosphatase 1HJBrowse
74417at6073Fragmented642.5339.0pspe_0.1.m1.71355.m1delta(8)-fatty-acid desaturaseJBrowse
74419at6073Complete1790.9928.0pspe_0.1.m1.38291.m1solute carrier family 12 member 6JBrowse
74420at6073Complete933.9583.0pspe_0.1.m1.24823.m1Coiled-coil domain-containing protein 22JBrowse
74423at6073Complete596.4327.0pspe_0.1.m1.50720.m1dehydrodolichyl diphosphate synthase complex subunit DHDDSJBrowse
74424at6073Complete672.8433.0pspe_0.1.m1.65809.m1signal peptide peptidase-like 2BJBrowse
74425at6073Complete595.3377.0pspe_0.1.m1.5959.m1Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complexJBrowse
74426at6073Complete979.0572.0pspe_0.1.m1.59770.m1TBC1 domain family member 15JBrowse
74427at6073Complete956.6679.0pspe_0.1.m1.15934.m1phosphatidylinositol polyphosphate 5-phosphatase type IV-likeJBrowse
74434at6073Complete1249.9711.0pspe_0.1.m1.32609.m1proprotein convertase subtilisin/kexin type 4-likeJBrowse
74439at6073Complete808.3451.0pspe_0.1.m1.67420.m1cyclin AJBrowse
74446at6073Complete901.4484.0pspe_0.1.m1.9709.m1PX domain-containing protein kinase-like proteinJBrowse
74455at6073Complete863.8519.0pspe_0.1.m1.40041.m1tyrosine-protein kinase RYK-likeJBrowse
74457at6073Complete323.2170.0pspe_0.1.m1.29878.m1tubulin polymerization-promoting protein family member 2JBrowse
74460at6073Complete537.5304.0pspe_0.1.m1.21293.m1GTPase Era, mitochondrial-likeJBrowse
74463at6073Complete444.6263.0pspe_0.1.m1.36016.m1inositol monophosphatase 1JBrowse
74464at6073Complete2167.31143.0pspe_0.1.m1.34600.m1paired amphipathic helix protein Sin3a-likeJBrowse
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