BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
4751at6073Complete2595.81545.0alor_g16128.t1laminin subunit gamma-1JBrowse
4789at6073Duplicated502.9355.0alor_g1399.t1nucleoporin NUP35-likeJBrowse
4789at6073Duplicated499.8355.0alor_g1399.t2nucleoporin NUP35-likeJBrowse
4789at6073Duplicated462.5355.0alor_g1399.t3nucleoporin NUP35-likeJBrowse
4800at6073Complete427.3245.0alor_g20481.t1testis-expressed protein 47JBrowse
4805at6073Complete173.283.0alor_g11170.t140S ribosomal protein S21JBrowse
4808at6073Complete574.2348.0alor_g22090.t1P2X receptorJBrowse
4816at6073Complete599.5338.0alor_g15204.t1tetratricopeptide repeat protein 17JBrowse
4848at6073Complete578.8287.0alor_g4607.t1F-actin-capping proteinJBrowse
4849at6073Complete378.6214.0alor_g3350.t1synaptogyrin-2-likeJBrowse
4875at6073Complete424.1253.0alor_g26970.t1mediator of RNA polymerase II transcription subunit 6JBrowse
4886at6073Complete413.5230.0alor_g2793.t1exosome complex component rrp40JBrowse
4889at6073Complete403.2185.0alor_g1614.t1GTP-binding protein SAR1b-likeJBrowse
4895at6073Complete207.5117.0alor_g3859.t1proteasome maturation protein-likeJBrowse
4908at6073Complete463.6295.0alor_g15317.t1lysophosphatidylserine lipase ABHD12-likeJBrowse
4922at6073Duplicated735.4389.0alor_g2641.t1serine/threonine-protein kinase 32B-likeJBrowse
4922at6073Duplicated717.0381.0alor_g2641.t2serine/threonine-protein kinase 32B-likeJBrowse
4936at6073Complete455.3222.0alor_g10614.t1ATP-dependent Clp protease proteolytic subunit-likeJBrowse
4958at6073Complete123.285.0alor_g7828.t1cAMP-regulated phosphoprotein 19JBrowse
4963at6073Complete1159.1552.0alor_g5844.t1methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-likeJBrowse
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