BUSCO Gene Details in Acropora microphthalma

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora microphthalmaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.8% [S: 69.1%, D: 11.7%] F: 10.9%, M: 8.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,588 (80.8%)2,212 (69.1%)376 (11.7%)348 (10.9%)267 (8.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora microphthalma: 3,406 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
4693at6073Complete933.6513.0amic_s0042.g104.t1frizzled-5JBrowse
4751at6073Complete936.21509.0amic_s0075.g69.t1laminin subunit gamma-1JBrowse
4789at6073Duplicated426.7307.0amic_s0063.g19.t1nucleoporin NUP35-likeJBrowse
4789at6073Duplicated423.7307.0amic_s0063.g19.t2nucleoporin NUP35-likeJBrowse
4800at6073Fragmented214.6132.0amic_s0373.g2.t1testis-expressed protein 47JBrowse
4805at6073Complete175.783.0amic_s0075.g64.t140S ribosomal protein S21JBrowse
4808at6073Complete566.8348.0amic_s0187.g26.t1P2X receptorJBrowse
4816at6073Complete599.5338.0amic_s0276.g4.t1tetratricopeptide repeat protein 17JBrowse
4848at6073Complete578.2287.0amic_s0071.g36.t1F-actin-capping proteinJBrowse
4849at6073Complete380.4214.0amic_s0119.g17.t1synaptogyrin-2-likeJBrowse
4875at6073Complete423.6253.0amic_s0007.g38.t1mediator of RNA polymerase II transcription subunit 6JBrowse
4886at6073Complete416.3231.0amic_s0010.g167.t1exosome complex component rrp40JBrowse
4889at6073Complete404.3185.0amic_s0180.g11.t1GTP-binding protein SAR1b-likeJBrowse
4895at6073Complete207.5117.0amic_s0098.g40.t1proteasome maturation protein-likeJBrowse
4908at6073Complete465.0295.0amic_s0215.g33.t1lysophosphatidylserine lipase ABHD12-likeJBrowse
4922at6073Complete735.2389.0amic_s0113.g144.t1serine/threonine-protein kinase 32B-likeJBrowse
4936at6073Duplicated456.6222.0amic_s0050.g19.t3ATP-dependent Clp protease proteolytic subunit-likeJBrowse
4936at6073Duplicated456.0222.0amic_s0050.g19.t1ATP-dependent Clp protease proteolytic subunit-likeJBrowse
4958at6073Complete123.285.0amic_s0320.g6.t1cAMP-regulated phosphoprotein 19JBrowse
4972at6073Complete382.8224.0amic_s0396.g1.t1glyoxalase 3-likeJBrowse
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