BUSCO Gene Details in Acropora palmata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora palmataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 99.7% [S: 71.5%, D: 28.2%] F: 0.1%, M: 0.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
3,194 (99.7%)2,290 (71.5%)904 (28.2%)3 (0.1%)6 (0.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora palmata: 4,748 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3247at6073Complete665.2344.0XP_074618149.1Geranylgeranyl transferase type-1 subunit betaJBrowse
3252at6073Complete703.8339.0XP_074616573.1nucleoporin SEH1-likeJBrowse
3337at6073Complete1090.1503.0XP_074637540.1pre-mRNA-processing factor 19JBrowse
3345at6073Duplicated569.9304.0XP_074627125.1Forkhead box protein L2JBrowse
3345at6073Duplicated549.9288.0XP_074627127.1Forkhead box protein L2JBrowse
3345at6073Duplicated549.9288.0XP_074627128.1Forkhead box protein L2JBrowse
3345at6073Duplicated549.9288.0XP_074627129.1Forkhead box protein L2JBrowse
3345at6073Duplicated549.9288.0XP_074627130.1Forkhead box protein L2JBrowse
3345at6073Duplicated549.9288.0XP_074627131.1Forkhead box protein L2JBrowse
3346at6073Duplicated633.1306.0XP_074627289.1mitochondrial 2-oxoglutarate/malate carrier proteinJBrowse
3346at6073Duplicated635.7304.0XP_074627288.1mitochondrial 2-oxoglutarate/malate carrier proteinJBrowse
3346at6073Duplicated544.2264.0XP_074627290.1mitochondrial 2-oxoglutarate/malate carrier proteinJBrowse
3482at6073Complete695.3411.0XP_074618274.1E3 ubiquitin-protein ligase MYLIPJBrowse
3490at6073Complete575.0297.0XP_074630866.1protein FAM166B-likeJBrowse
3507at6073Duplicated316.5175.0XP_074630828.1lactoylglutathione lyase-likeJBrowse
3507at6073Duplicated301.4175.0XP_074630827.1lactoylglutathione lyase-likeJBrowse
3517at6073Duplicated492.9317.0XP_074617296.139S ribosomal protein L38, mitochondrial-likeJBrowse
3517at6073Duplicated486.2317.0XP_074617297.139S ribosomal protein L38, mitochondrial-likeJBrowse
3526at6073Complete207.7105.0XP_074613540.160S ribosomal protein L44JBrowse
3527at6073Duplicated1132.0698.0XP_074617922.1short transient receptor potential channel 4-associated proteinJBrowse
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