BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 5,222 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
2886at6073Duplicated142.5127.0g13503.t1.1protein LTO1 homologJBrowse
2934at6073Duplicated1325.2612.0BRAKERHOCP00005020341.1V-type proton ATPase catalytic subunit AJBrowse
2934at6073Duplicated1325.2612.0g8897.t1.1V-type proton ATPase catalytic subunit AJBrowse
2987at6073Duplicated1464.8953.0BRAKERHOCP00005000866.1Vacuolar protein sorting-associated protein 18JBrowse
2987at6073Duplicated1464.8953.0g7604.t1.1Vacuolar protein sorting-associated protein 18JBrowse
2987at6073Duplicated1393.6928.0BRAKERHOCP00005000867.1Vacuolar protein sorting-associated protein 18JBrowse
2987at6073Duplicated1393.6928.0g7604.t2.1Vacuolar protein sorting-associated protein 18JBrowse
2993at6073Duplicated835.1541.0BRAKERHOCP00005019327.1protein REDUCED WALL ACETYLATION 1JBrowse
2993at6073Duplicated835.1541.0g9333.t1.1protein REDUCED WALL ACETYLATION 1JBrowse
2993at6073Duplicated781.8541.0BRAKERHOCP00005018729.1protein REDUCED WALL ACETYLATION 1JBrowse
2993at6073Duplicated781.8541.0g9332.t1.1protein REDUCED WALL ACETYLATION 1JBrowse
3019at6073Duplicated263.0201.0BRAKERHOCP00005000771.1cilia- and flagella-associated protein 107-likeJBrowse
3019at6073Duplicated263.0201.0g7152.t1.1cilia- and flagella-associated protein 107-likeJBrowse
3025at6073Duplicated401.0219.0BRAKERHOCP00005014132.1proteasome subunit beta type-1-AJBrowse
3025at6073Duplicated401.0219.0g20222.t1.1proteasome subunit beta type-1-AJBrowse
3028at6073Duplicated113.7103.0BRAKERHOCP00005011520.1replication protein A 14 kDa subunit-likeJBrowse
3028at6073Duplicated113.7103.0g13899.t1.1replication protein A 14 kDa subunit-likeJBrowse
3050at6073Duplicated265.3343.0BRAKERHOCP00005016433.1Peroxisomal biogenesis factor 3JBrowse
3050at6073Duplicated265.3343.0g605.t1.1Peroxisomal biogenesis factor 3JBrowse
3060at6073Duplicated498.3448.0BRAKERHOCP00005011126.1pyruvate dehydrogenase JBrowse
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