BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
5057at6073Duplicated279.0140.0HOLI04645.G79540S ribosomal protein S16JBrowse
5063at6073Complete539.9302.0HOLI00992.G27872mitoferrin-1JBrowse
5121at6073Complete330.9178.0HOLI00251.G8877GTP-binding protein RhebJBrowse
5141at6073Complete1174.8657.0HOLI00442.G54354S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthaseJBrowse
5181at6073Complete1038.1508.0HOLI00324.G55806WD40 repeat-containing SMU1JBrowse
5187at6073Complete583.9386.0HOLI00146.G41603lymphocyte expansion molecule-likeJBrowse
5223at6073Complete592.1430.0HOLI00888.G33490inactive peptidyl-prolyl cis-trans isomerase FKBP6-likeJBrowse
5397at6073Duplicated267.4129.0HOLI01284.G411740S ribosomal protein S15aJBrowse
5397at6073Duplicated267.4129.0HOLI03283.G5932840S ribosomal protein S15aJBrowse
5399at6073Duplicated154.4106.0HOLI00932.G38086protein lin-52 homologJBrowse
5399at6073Duplicated132.897.0HOLI05365.G41598protein lin-52 homologJBrowse
5460at6073Complete378.5218.0HOLI02427.G8359glutamine amidotransferase-like class 1 domain-containing 1JBrowse
5474at6073Complete281.8190.0HOLI04021.G7008U8 snoRNA-decapping enzyme-likeJBrowse
5475at6073Complete284.8182.0HOLI02306.G47522ATP synthase subunit C lysine N-methyltransferase-likeJBrowse
5527at6073Complete227.0151.0HOLI01005.G6033protein SYS1 homologJBrowse
5560at6073Complete486.8357.0HOLI00894.G44487snRNA-activating protein complex subunit 3JBrowse
5670at6073Complete347.4227.0HOLI00441.G47508MIT domain-containing protein 1JBrowse
5708at6073Complete581.2338.0HOLI01541.G48785ATPase family AAA domain-containing 1JBrowse
5718at6073Complete867.3955.0HOLI00001.G53829Valine--tRNA ligaseJBrowse
5972at6073Complete133.6242.0HOLI00211.G58322GRB2-associated-binding protein 1-likeJBrowse
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