BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
4958at6073Complete113.081.0pspe_0.1.m1.56391.m1cAMP-regulated phosphoprotein 19JBrowse
4963at6073Complete1032.6511.0pspe_0.1.m1.26269.m1methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-likeJBrowse
4972at6073Complete417.7224.0pspe_0.1.m1.54788.m1glyoxalase 3-likeJBrowse
5046at6073Complete795.5505.0pspe_0.1.m1.57117.m1GPI mannosyltransferase 3JBrowse
5052at6073Complete1471.5804.0pspe_0.1.m1.31138.m1dipeptidyl peptidase 9JBrowse
5057at6073Duplicated294.3141.0pspe_0.1.m1.71234.m140S ribosomal protein S16JBrowse
5057at6073Duplicated294.1141.0pspe_0.1.m1.61014.m140S ribosomal protein S16JBrowse
5063at6073Complete622.3309.0pspe_0.1.m1.34266.m1mitoferrin-1JBrowse
5121at6073Complete365.3183.0pspe_0.1.m1.54237.m1GTP-binding protein RhebJBrowse
5127at6073Complete471.0272.0pspe_0.1.m1.64964.m1E3 ubiquitin-protein ligase CCNB1IP1-likeJBrowse
5132at6073Complete573.3352.0pspe_0.1.m1.31079.m1pleckstrin-2-likeJBrowse
5141at6073Complete1034.6655.0pspe_0.1.m1.25583.m1S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthaseJBrowse
5181at6073Complete1139.4508.0pspe_0.1.m1.31154.m1WD40 repeat-containing SMU1JBrowse
5187at6073Complete664.9342.0pspe_0.1.m1.53248.m1lymphocyte expansion molecule-likeJBrowse
5223at6073Complete677.9430.0pspe_0.1.m1.19168.m1inactive peptidyl-prolyl cis-trans isomerase FKBP6-likeJBrowse
5224at6073Complete810.1447.0pspe_0.1.m1.66205.m1calcium-independent phospholipase A2-gamma-likeJBrowse
5253at6073Fragmented926.2568.0pspe_0.1.m1.19321.m1GPI inositol-deacylase-likeJBrowse
5397at6073Complete277.9129.0pspe_0.1.m1.48129.m140S ribosomal protein S15aJBrowse
5399at6073Fragmented98.768.0pspe_0.1.m1.18918.m1protein lin-52 homologJBrowse
5474at6073Complete332.8190.0pspe_0.1.m1.39259.m1U8 snoRNA-decapping enzyme-likeJBrowse
Go to page: of 151 pages
TOP