BUSCO Gene Details in Ricordea florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Ricordea floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.5% [S: 48.6%, D: 31.9%] F: 9.0%, M: 10.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,578 (80.5%)1,556 (48.6%)1,022 (31.9%)288 (9.0%)337 (10.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Ricordea florida: 4,305 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
3185at6073Duplicated829.8423.0ENSORFP00005014588.1FAD/NAD(P)-binding domainJBrowse
3192at6073Duplicated332.0158.0ENSORFP00005026726.1N-alpha-acetyltransferase 50JBrowse
3192at6073Duplicated291.0158.0ENSORFP00005026709.1N-alpha-acetyltransferase 50JBrowse
3247at6073Duplicated651.1343.0ENSORFP00005038184.1Geranylgeranyl transferase type-1 subunit betaJBrowse
3247at6073Duplicated615.4343.0ENSORFP00005038171.1Geranylgeranyl transferase type-1 subunit betaJBrowse
3252at6073Complete567.6285.0ENSORFP00005052979.1nucleoporin SEH1-likeJBrowse
3337at6073Complete1074.1503.0ENSORFP00005027316.1pre-mRNA-processing factor 19JBrowse
3345at6073Duplicated508.8304.0ENSORFP00005010572.1Forkhead box protein L2JBrowse
3345at6073Duplicated490.3288.0ENSORFP00005010566.1Forkhead box protein L2JBrowse
3345at6073Duplicated490.3288.0ENSORFP00005010578.1Forkhead box protein L2JBrowse
3346at6073Complete632.4304.0ENSORFP00005006102.1mitochondrial 2-oxoglutarate/malate carrier proteinJBrowse
3507at6073Duplicated249.7150.0ENSORFP00005006526.1lactoylglutathione lyase-likeJBrowse
3507at6073Duplicated258.8148.0ENSORFP00005006511.1lactoylglutathione lyase-likeJBrowse
3517at6073Complete440.1318.0ENSORFP00005026682.139S ribosomal protein L38, mitochondrial-likeJBrowse
3526at6073Complete211.7105.0ENSORFP00005023068.160S ribosomal protein L44JBrowse
3527at6073Complete1090.3697.0ENSORFP00005007593.1short transient receptor potential channel 4-associated proteinJBrowse
3559at6073Fragmented717.5344.0ENSORFP00005044170.1putative ATP-dependent RNA helicase ddx6JBrowse
3561at6073Complete641.7386.0ENSORFP00005010429.1spermatogenesis-associated protein 48JBrowse
3570at6073Duplicated336.0178.0ENSORFP00005042017.1ras-related protein Rab-13 isoform X1JBrowse
3570at6073Duplicated312.8159.0ENSORFP00005042007.1ras-related protein Rab-13 isoform X1JBrowse
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