BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
73893at6073Complete953.1577.0FUN_031067-T1DNA polymerase alpha subunit BJBrowse
73894at6073Complete950.1534.0FUN_040548-T1vacuolar protein sorting-associated protein 33BJBrowse
73896at6073Complete808.1461.0FUN_008663-T1orotidine 5'-phosphate decarboxylaseJBrowse
73899at6073Complete465.7237.0FUN_015057-T1derlin-2JBrowse
73901at6073Duplicated2407.61394.0FUN_007999-T1ATP-dependent RNA helicase TDRD9JBrowse
73901at6073Duplicated2265.61277.0FUN_007999-T2ATP-dependent RNA helicase TDRD9JBrowse
73908at6073Complete741.0394.0FUN_004700-T1coiled-coil domain-containing protein 105JBrowse
73909at6073Complete296.1169.0FUN_008706-T1mesencephalic astrocyte-derived neurotrophic factor homologJBrowse
73911at6073Complete381.8207.0FUN_012113-T1yrdC domain-containing protein, mitochondrial-likeJBrowse
73912at6073Complete560.1303.0FUN_029126-T1LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF113A-likeJBrowse
73913at6073Complete1083.5586.0FUN_037568-T1leucine-rich repeat protein soc-2 homologJBrowse
73921at6073Complete1601.9810.0FUN_030656-T1dynein regulatory complex subunit 7JBrowse
73924at6073Complete2195.51202.0FUN_023499-T1WD repeat-containing protein 11JBrowse
73926at6073Duplicated924.3525.0FUN_035890-T2DDB1- and CUL4-associated factor 11JBrowse
73926at6073Duplicated847.4479.0FUN_035890-T1DDB1- and CUL4-associated factor 11JBrowse
73927at6073Duplicated1457.5842.0FUN_024111-T1cGMP-dependent 3',5'-cyclic phosphodiesteraseJBrowse
73927at6073Duplicated1289.8755.0FUN_024111-T2cGMP-dependent 3',5'-cyclic phosphodiesteraseJBrowse
73928at6073Complete403.7229.0FUN_008213-T1Alpha-ketoglutarate-dependent dioxygenase alkB 6JBrowse
73931at6073Complete940.7466.0FUN_008914-T1tubulin epsilon chain-likeJBrowse
73933at6073Complete836.9405.0FUN_035243-T1Septin-7JBrowse
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