BUSCO Gene Details in Montipora capitata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Montipora capitataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 63.3% [S: 62.7%, D: 0.5%] F: 15.4%, M: 21.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,026 (63.3%)2,009 (62.7%)17 (0.5%)494 (15.4%)683 (21.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Montipora capitata: 2,540 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77200at6073Complete609.6515.0g15029.t1scaffold protein salvador-likeJBrowse
77208at6073Complete701.6467.0g1435.t1ribonuclease IIIJBrowse
77217at6073Complete408.6253.0g5939.t1ribosomal L1 domain-containing protein 1JBrowse
77220at6073Complete388.1271.0g20124.t1uncharacterized protein LOC114517244JBrowse
77225at6073Complete2877.22021.0g870.t1abnormal spindle-like microcephaly-associated proteinJBrowse
77227at6073Complete769.4443.0g11502.t1ETS translocation variant 1JBrowse
77228at6073Complete436.9305.0g12343.t1transcription factor AP-1-likeJBrowse
77240at6073Complete924.1739.0g12698.t1protein PAT1 homolog 1JBrowse
77250at6073Complete1295.1890.0g9364.t1rab GTPase-binding effector protein 1JBrowse
77264at6073Complete1028.3755.0g15701.t1RNA-binding protein 28JBrowse
77285at6073Complete148.7104.0g30519.t139S ribosomal protein L52, mitochondrial-likeJBrowse
77287at6073Complete80.3130.0g35813.t1uncharacterized protein LOC110238137JBrowse
77288at6073Complete654.0460.0g5195.t1TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6LJBrowse
77294at6073Fragmented681.0409.0g29383.t1Serine/threonine-protein phosphatase 4 regulatory subunit 4JBrowse
77312at6073Fragmented464.1233.0g30303.t1probable ATP-dependent RNA helicase DDX20JBrowse
77313at6073Fragmented462.9396.0g9644.t1axin-1JBrowse
77318at6073Complete435.0286.0g20149.t1FACT complex subunit SSRP1-likeJBrowse
77333at6073Fragmented298.6174.0g7204.t1anaphase-promoting complex subunit 5JBrowse
77334at6073Fragmented203.2129.0g12610.t1disks large-associated protein 1-likeJBrowse
77344at6073Complete395.0294.0g1652.t1thioredoxin domain-containing protein 15JBrowse
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