BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 2,721 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76135at6073Complete633.9489BRAKERHOCP00005016074.1Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1JBrowse
76143at6073Duplicated518.1338BRAKERHOCP00005002073.1ubiquitin carboxyl-terminal hydrolase MINDY-1JBrowse
76143at6073Duplicated485.7293BRAKERHOCP00005002662.1ubiquitin carboxyl-terminal hydrolase MINDY-1JBrowse
76155at6073Complete335.8311BRAKERHOCP00005001281.1O(6)-methylguanine-induced apoptosis 2JBrowse
76157at6073Complete1040.2828BRAKERHOCP00005020641.1integrator complex subunit 6JBrowse
76158at6073Complete458.4317BRAKERHOCP00005010994.1putative RNA-binding protein Luc7-like 2JBrowse
76172at6073Fragmented704.2412BRAKERHOCP00005014609.1peptidyl-prolyl cis-trans isomerase-like 4JBrowse
76175at6073Fragmented363.5315BRAKERHOCP00005007502.1homeobox protein Meis1-likeJBrowse
76182at6073Complete307.7256BRAKERHOCP00005003471.1Cell division cycle-associated protein 7JBrowse
76185at6073Complete1068.1957BRAKERHOCP00005000150.1Centrosomal of 120 kDaJBrowse
76188at6073Complete305.8185BRAKERHOCP00005010452.1Golgi apparatus membrane protein TVP23 homolog B-likeJBrowse
76194at6073Complete295.8312BRAKERHOCP00005019017.1E3 ubiquitin-protein ligase HakaiJBrowse
76199at6073Complete550.3432BRAKERHOCP00005020266.1thiamine transporter 1JBrowse
76203at6073Complete794.6688BRAKERHOCP00005016187.1MacoilinJBrowse
76204at6073Complete1138.31227BRAKERHOCP00005015273.1serine/threonine-protein kinase ULK4 isoform X1JBrowse
76216at6073Fragmented132.5153BRAKERHOCP00005020699.1Box C/D snoRNA protein 1JBrowse
76222at6073Complete201.9162BRAKERHOCP00005017880.1transmembrane protein 128JBrowse
76225at6073Complete392.6363BRAKERHOCP00005003405.1putative neutral sphingomyelinaseJBrowse
76228at6073Complete677.5588BRAKERHOCP00005008262.1F-BAR and double SH3 domains protein 2JBrowse
76237at6073Complete418.0380BRAKERHOCP00005011397.1stAR-related lipid transfer protein 3-likeJBrowse
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