BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75107at6073Complete1052.7640.0pspe_0.1.m1.8137.m1N-terminal kinase-like proteinJBrowse
75108at6073Complete764.3382.0pspe_0.1.m1.47880.m1Radial spoke head protein 3JBrowse
75109at6073Complete1017.8545.0pspe_0.1.m1.7780.m1Myotubularin-related protein 9JBrowse
75115at6073Complete621.7378.0pspe_0.1.m1.35032.m139S ribosomal protein L3, mitochondrialJBrowse
75116at6073Complete1287.1799.0pspe_0.1.m1.28307.m1lysine-specific demethylase 2B-likeJBrowse
75119at6073Complete406.6209.0pspe_0.1.m1.28305.m1calcium release-activated calcium channel protein 1JBrowse
75126at6073Complete518.7250.0pspe_0.1.m1.25582.m1Ribosome maturation protein SBDSJBrowse
75129at6073Duplicated802.9457.0pspe_0.1.m1.49261.m1potassium voltage-gated channel subfamily A member 1JBrowse
75129at6073Duplicated686.5408.0pspe_0.1.m1.12784.m1potassium voltage-gated channel subfamily A member 1JBrowse
75133at6073Complete983.4547.0pspe_0.1.m1.48987.m1transcription factor Dp-1JBrowse
75138at6073Complete1577.11084.0pspe_0.1.m1.30429.m1pleckstrin homology domain-containing family H member 2-likeJBrowse
75152at6073Complete1591.7902.0pspe_0.1.m1.34824.m1protein HIRA-likeJBrowse
75154at6073Complete871.0498.0pspe_0.1.m1.27442.m1Runt-related transcription factor 1JBrowse
75159at6073Complete812.1458.0pspe_0.1.m1.20253.m1dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrialJBrowse
75162at6073Complete1406.8808.0pspe_0.1.m1.48820.m197 kDa heat shock protein-likeJBrowse
75163at6073Complete467.3311.0pspe_0.1.m1.15118.m1Vacuolar protein sorting-associated protein vta1JBrowse
75165at6073Complete923.3625.0pspe_0.1.m1.25378.m1islet cell autoantigen 1JBrowse
75169at6073Complete390.3258.0pspe_0.1.m1.44616.m1protein Tob1JBrowse
75172at6073Fragmented642.3357.0pspe_0.1.m1.61029.m1Dephospho-CoA kinaseJBrowse
75174at6073Fragmented751.7390.0pspe_0.1.m1.57617.m1Serine/threonine-protein kinase RIO1JBrowse
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