BUSCO Gene Details in Scolanthus callimorphus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Scolanthus callimorphusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 74.0% [S: 60.0%, D: 14.1%] F: 14.8%, M: 11.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,371 (74.0%)1,921 (60.0%)450 (14.1%)473 (14.8%)359 (11.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Scolanthus callimorphus: 3,303 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74141at6073Complete473.0282.0NY_Scal100_v1.20145.1presenilins-associated rhomboid-like protein, mitochondrialJBrowse
74143at6073Complete1240.4735.0NY_Scal100_v1.1909.1programmed cell death 6-interacting proteinJBrowse
74144at6073Duplicated597.1325.0NY_Scal100_v1.23546.1tribbles homolog 2JBrowse
74144at6073Duplicated597.1325.0NY_Scal100_v1.40868.1tribbles homolog 2JBrowse
74146at6073Complete262.3131.0NY_Scal100_v1.34024.140S ribosomal protein S24-likeJBrowse
74159at6073Complete418.8210.0NY_Scal100_v1.967.1transmembrane protein 272JBrowse
74160at6073Duplicated1028.5566.0NY_Scal100_v1.52989.1WD repeat-containing protein 70JBrowse
74160at6073Duplicated875.8566.0NY_Scal100_v1.46670.1WD repeat-containing protein 70JBrowse
74164at6073Complete602.3393.0NY_Scal100_v1.31303.1clusterin-associated protein 1JBrowse
74166at6073Complete688.9343.0NY_Scal100_v1.33893.1adenosine monophosphate-protein transferase FICD homologJBrowse
74171at6073Fragmented1025.6584.0NY_Scal100_v1.53683.1oxysterol-binding protein-related protein 8-likeJBrowse
74172at6073Complete1311.0820.0NY_Scal100_v1.34333.1transforming growth factor-beta receptor-associated protein 1JBrowse
74174at6073Duplicated722.9408.0NY_Scal100_v1.42081.1L-2-hydroxyglutarate dehydrogenase, mitochondrial-likeJBrowse
74174at6073Duplicated723.4384.0NY_Scal100_v1.15364.1L-2-hydroxyglutarate dehydrogenase, mitochondrial-likeJBrowse
74177at6073Complete947.7573.0NY_Scal100_v1.52309.1Sperm-tail PG-rich repeat-containing protein 2JBrowse
74179at6073Complete527.6281.0NY_Scal100_v1.14959.1uncharacterized protein C15orf41 homologJBrowse
74180at6073Complete254.4149.0NY_Scal100_v1.51316.1actin-related protein 2/3 complex subunit 5-AJBrowse
74183at6073Duplicated870.1447.0NY_Scal100_v1.25596.1COP9 signalosome complex subunit 1JBrowse
74183at6073Duplicated870.1447.0NY_Scal100_v1.26551.1COP9 signalosome complex subunit 1JBrowse
74188at6073Complete436.1283.0NY_Scal100_v1.7425.1PIH1 domain-containing protein 1JBrowse
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