BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75129at6073Duplicated681.6419.0HOLI00042.G5132potassium voltage-gated channel subfamily A member 1JBrowse
75129at6073Duplicated679.8419.0HOLI01520.G11981potassium voltage-gated channel subfamily A member 1JBrowse
75133at6073Complete646.7475.0HOLI00561.G6446transcription factor Dp-1JBrowse
75138at6073Duplicated1217.21006.0HOLI01481.G44524pleckstrin homology domain-containing family H member 2-likeJBrowse
75138at6073Duplicated1111.9899.0HOLI00133.G23286pleckstrin homology domain-containing family H member 2-likeJBrowse
75141at6073Complete915.9574.0HOLI00031.G22682double-strand break repair protein MRE11-likeJBrowse
75154at6073Complete448.8497.0HOLI00225.G38516Runt-related transcription factor 1JBrowse
75159at6073Fragmented429.3290.0HOLI00889.G45435dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrialJBrowse
75162at6073Fragmented591.5357.0HOLI01157.G3408497 kDa heat shock protein-likeJBrowse
75169at6073Fragmented245.4184.0HOLI00976.G60450protein Tob1JBrowse
75174at6073Complete803.3503.0HOLI00318.G57989Serine/threonine-protein kinase RIO1JBrowse
75180at6073Complete535.3321.0HOLI00573.G11322round spermatid basic protein 1-like proteinJBrowse
75184at6073Complete842.4878.0HOLI00591.G747transcription factor SPT20 homologJBrowse
75187at6073Complete624.6396.0HOLI00737.G29390RNA pseudouridylate synthase domain-containing protein 2JBrowse
75189at6073Complete522.9335.0HOLI00025.G12444tropomodulin-1JBrowse
75193at6073Duplicated1191.8858.0HOLI00175.G10850probable RNA-binding protein 19JBrowse
75193at6073Duplicated1049.8711.0HOLI00120.G31945probable RNA-binding protein 19JBrowse
75197at6073Complete378.1235.0HOLI00560.G4020160S ribosomal protein L6JBrowse
75202at6073Complete953.0680.0HOLI01397.G14200serine/threonine-protein phosphatase 4 regulatory subunit 3-likeJBrowse
75207at6073Fragmented494.5302.0HOLI01256.G36590SCY1-like protein 2JBrowse
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