BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74286at6073Complete537.9282.0FUN_001613-T1Uracil-DNA glycosylaseJBrowse
74288at6073Complete615.0339.0FUN_000270-T1mitochondrial coenzyme A transporter SLC25A42JBrowse
74289at6073Complete417.7228.0FUN_013388-T1protein SCO1 homolog, mitochondrial-likeJBrowse
74292at6073Duplicated1200.5668.0FUN_001957-T1translation initiation factor eIF-2B subunit epsilonJBrowse
74292at6073Duplicated1167.2654.0FUN_001957-T2translation initiation factor eIF-2B subunit epsilonJBrowse
74300at6073Complete590.5372.0FUN_004904-T1DDB1- and CUL4-associated factor 12JBrowse
74311at6073Complete1332.8736.0FUN_001141-T1histone acetyltransferase KAT6B-likeJBrowse
74319at6073Complete348.2237.0FUN_033731-T1DNA-directed RNA polymerase I subunit RPA43JBrowse
74323at6073Complete702.3432.0FUN_017761-T1protein ABHD18-likeJBrowse
74329at6073Fragmented462.2213.0FUN_009822-T1uncharacterized protein LOC100215086JBrowse
74337at6073Duplicated4499.72361.0FUN_018530-T2spectrin beta chain, non-erythrocytic 1-likeJBrowse
74337at6073Duplicated4419.62316.0FUN_018530-T1spectrin beta chain, non-erythrocytic 1-likeJBrowse
74347at6073Complete472.4241.0FUN_024130-T1BTB/POZ domain-containing protein KCTD16JBrowse
74350at6073Duplicated1049.1678.0FUN_024390-T2prickle planar cell polarity protein 3-B-like isoform X1JBrowse
74350at6073Duplicated1008.1656.0FUN_024390-T3prickle planar cell polarity protein 3-B-like isoform X1JBrowse
74351at6073Complete375.9211.0FUN_007800-T1N-alpha-acetyltransferase 30JBrowse
74360at6073Fragmented441.8241.0FUN_037756-T1Radial spoke head 14JBrowse
74363at6073Complete572.5330.0FUN_032153-T1zinc finger protein-like 1JBrowse
74369at6073Complete886.8487.0FUN_041531-T2eukaryotic translation initiation factor 2AJBrowse
74370at6073Complete738.1393.0FUN_025540-T1Leucine-rich repeat-containing protein 34JBrowse
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