BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75276at6073Complete552.4354.0pspe_0.1.m1.33912.m1nudC domain-containing protein 3JBrowse
75283at6073Complete1081.4718.0pspe_0.1.m1.8131.m1DNA polymerase, Y-family, little finger domainJBrowse
75288at6073Complete726.9431.0pspe_0.1.m1.21695.m1E3 ubiquitin-protein ligase rnf14JBrowse
75295at6073Complete940.2537.0pspe_0.1.m1.64210.m1serine/threonine-protein kinase BRSK2JBrowse
75301at6073Complete1060.2595.0pspe_0.1.m1.14615.m1ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrialJBrowse
75307at6073Complete419.1233.0pspe_0.1.m1.28951.m1ATP synthase mitochondrial F1 complex assembly factor 2JBrowse
75316at6073Complete1093.0647.0pspe_0.1.m1.28127.m1probable ATP-dependent RNA helicase DDX27JBrowse
75322at6073Complete195.2124.0pspe_0.1.m1.20182.m128S ribosomal protein S28, mitochondrialJBrowse
75324at6073Complete848.7477.0pspe_0.1.m1.47566.m1basal body-orientation factor 1JBrowse
75325at6073Complete392.3269.0pspe_0.1.m1.59590.m128S ribosomal protein S22, mitochondrial-likeJBrowse
75326at6073Complete862.8535.0pspe_0.1.m1.50497.m1ceramide kinaseJBrowse
75329at6073Fragmented262.9149.0pspe_0.1.m1.31421.m1hemK methyltransferase family member 2JBrowse
75336at6073Fragmented1413.1843.0pspe_0.1.m1.14157.m1nucleolar protein 6JBrowse
75346at6073Fragmented243.8135.0pspe_0.1.m1.45855.m1probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferaseJBrowse
75347at6073Complete3352.01985.0pspe_0.1.m1.27687.m1brefeldin A-inhibited guanine nucleotide-exchange protein 3JBrowse
75356at6073Complete974.8584.0pspe_0.1.m1.7743.m1X-ray repair cross-complementing protein 5JBrowse
75358at6073Complete931.2581.0pspe_0.1.m1.14704.m1Nitric oxide-associated protein 1JBrowse
75361at6073Fragmented250.0171.0pspe_0.1.m1.70334.m1RNA transcription, translation and transport factor proteinJBrowse
75369at6073Complete556.8321.0pspe_0.1.m1.24161.m1mesoderm-specific transcript protein-likeJBrowse
75378at6073Complete454.3298.0pspe_0.1.m1.68792.m1transmembrane protein 198JBrowse
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