BUSCO Gene Details in Acropora echinata

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora echinataBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.0% [S: 66.3%, D: 12.6%] F: 12.4%, M: 8.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,530 (79.0%)2,125 (66.3%)405 (12.6%)397 (12.4%)276 (8.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora echinata: 3,435 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74009at6073Duplicated1027.1613.0aech_s0067.g133.t1sec1 family domain-containing protein 2JBrowse
74009at6073Duplicated1026.7613.0aech_s0067.g133.t3sec1 family domain-containing protein 2JBrowse
74009at6073Duplicated1024.0613.0aech_s0067.g133.t2sec1 family domain-containing protein 2JBrowse
74010at6073Complete242.8137.0aech_s0001.g274.t1Multiple coagulation factor deficiency protein 2JBrowse
74013at6073Fragmented238.5150.0aech_s0081.g78.t1tRNA-uridine aminocarboxypropyltransferase 2JBrowse
74020at6073Complete589.8345.0aech_s0063.g61.t1uncharacterized protein LOC116292643JBrowse
74036at6073Complete695.6393.0aech_s0014.g30.t1Transmembrane protein 43JBrowse
74037at6073Complete481.9285.0aech_s0066.g99.t1deoxynucleotidyltransferase terminal-interacting protein 1JBrowse
74040at6073Duplicated2088.01152.0aech_s0071.g48.t2protein transport protein Sec24C-likeJBrowse
74040at6073Duplicated1987.51095.0aech_s0071.g48.t1protein transport protein Sec24C-likeJBrowse
74045at6073Complete253.6140.0aech_s0176.g6.t1Coiled-coil domain-containing protein 58JBrowse
74056at6073Complete1749.5902.0aech_s0005.g257.t1sodium/calcium exchanger 1-likeJBrowse
74060at6073Fragmented226.5104.0aech_s0108.g39.t1DNA-directed RNA polymerase II subunit rpb4JBrowse
74063at6073Duplicated549.6308.0aech_s0010.g171.t1serine/threonine/tyrosine-interacting-like protein 1JBrowse
74063at6073Duplicated549.6308.0aech_s0010.g171.t2serine/threonine/tyrosine-interacting-like protein 1JBrowse
74069at6073Complete517.2319.0aech_s0019.g101.t1protein SETJBrowse
74071at6073Complete679.7379.0aech_s0066.g22.t1meiotic recombination protein SPO11-likeJBrowse
74080at6073Fragmented851.6519.0aech_s0127.g50.t3katanin p80 WD40 repeat-containing subunit B1-likeJBrowse
74086at6073Complete1254.7640.0aech_s0159.g32.t1ATP-dependent RNA helicase DHX33-likeJBrowse
74093at6073Complete219.3126.0aech_s0004.g400.t1respirasome Complex Assembly Factor 1JBrowse
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