BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74351at6073Complete376.5211.0alor_g26994.t1N-alpha-acetyltransferase 30JBrowse
74360at6073Complete614.5327.0alor_g418.t1Radial spoke head 14JBrowse
74363at6073Duplicated573.4330.0alor_g11225.t1zinc finger protein-like 1JBrowse
74363at6073Duplicated572.9330.0alor_g11225.t2zinc finger protein-like 1JBrowse
74369at6073Complete932.0529.0alor_g25480.t1eukaryotic translation initiation factor 2AJBrowse
74370at6073Complete732.9393.0alor_g24985.t1Leucine-rich repeat-containing protein 34JBrowse
74374at6073Complete318.9165.0alor_g16804.t1marginal zone B- and B1-cell-specific proteinJBrowse
74386at6073Complete638.7362.0alor_g16724.t1palmitoyltransferase ZDHHC6-likeJBrowse
74388at6073Complete493.7288.0alor_g10498.t1calumenin-B-likeJBrowse
74390at6073Complete986.8523.0alor_g1742.t1xylulose kinaseJBrowse
74395at6073Complete1770.11018.0alor_g21682.t1exportin-6JBrowse
74401at6073Complete897.8457.0alor_g4141.t1dnaJ homolog subfamily C member 3JBrowse
74404at6073Complete360.3199.0alor_g10637.t1COMM domain-containing protein 2JBrowse
74407at6073Duplicated504.3271.0alor_g6716.t2protein quaking-likeJBrowse
74407at6073Duplicated496.9271.0alor_g6716.t1protein quaking-likeJBrowse
74414at6073Duplicated787.9425.0alor_g18633.t1protein phosphatase 1HJBrowse
74414at6073Duplicated787.9425.0alor_g18828.t1protein phosphatase 1HJBrowse
74417at6073Duplicated809.4442.0alor_g5420.t1delta(8)-fatty-acid desaturaseJBrowse
74417at6073Duplicated808.8442.0alor_g17672.t1delta(8)-fatty-acid desaturaseJBrowse
74419at6073Complete1485.4784.0alor_g12459.t1solute carrier family 12 member 6JBrowse
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