BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 2,721 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76629at6073Complete438.9265BRAKERHOCP00005012568.1ubiquitin recognition factor in ER-associated degradation protein 1JBrowse
76633at6073Complete908.61230BRAKERHOCP00005014915.1putative ATP-dependent RNA helicase TDRD12JBrowse
76646at6073Complete240.2300BRAKERHOCP00005019964.1WD repeat-containing protein 53JBrowse
76650at6073Complete427.2457BRAKERHOCP00005014614.1biotin--protein ligaseJBrowse
76651at6073Complete333.4437BRAKERHOCP00005001215.1la-related protein 6JBrowse
76665at6073Complete1039.8858BRAKERHOCP00005000403.1coiled-coil and C2 domain-containing protein 1-likeJBrowse
76666at6073Fragmented1332.01228BRAKERHOCP00005004971.1rho GTPase-activating protein 45-likeJBrowse
76690at6073Complete145.198BRAKERHOCP00005010513.1protein boule-likeJBrowse
76701at6073Complete628.2568BRAKERHOCP00005004394.1Calcium homeostasis endoplasmic reticulumJBrowse
76707at6073Complete328.2326BRAKERHOCP00005016831.1coiled-coil domain-containing protein 149JBrowse
76720at6073Fragmented279.8302BRAKERHOCP00005002046.1rDNA transcriptional regulator pol5-likeJBrowse
76721at6073Fragmented340.8404BRAKERHOCP00005012663.1uncharacterized protein LOC116294853JBrowse
76734at6073Fragmented399.5310BRAKERHOCP00005008303.1RING finger protein 150JBrowse
76737at6073Complete327.7282BRAKERHOCP00005007392.1histone PARylation factor 1JBrowse
76744at6073Complete831.0478BRAKERHOCP00005020646.1mothers against decapentaplegic homolog 4JBrowse
76762at6073Fragmented104.5128BRAKERHOCP00005009877.1SUN domain-containing protein 3 isoform X1JBrowse
76775at6073Fragmented264.1258BRAKERHOCP00005018226.1Xyloside xylosyltransferase 1JBrowse
76778at6073Complete415.1446BRAKERHOCP00005011047.1malate dehydrogenase 1BJBrowse
76787at6073Complete586.7525BRAKERHOCP00005011858.1Far upstream element-binding protein 3JBrowse
76788at6073Fragmented320.0218BRAKERHOCP00005006888.1hsc70-interacting proteinJBrowse
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