BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75382at6073Duplicated792.3432.0pspe_0.1.m1.18075.m1potassium voltage-gated channel subfamily A member 7JBrowse
75382at6073Duplicated791.9432.0pspe_0.1.m1.41595.m1potassium voltage-gated channel subfamily A member 7JBrowse
75387at6073Complete1213.9753.0pspe_0.1.m1.60286.m1SID1 transmembrane family member 1JBrowse
75389at6073Complete151.779.0pspe_0.1.m1.12692.m1NADH dehydrogenase JBrowse
75392at6073Complete899.1492.0pspe_0.1.m1.56392.m1RNA-binding protein MEX3BJBrowse
75394at6073Complete659.7435.0pspe_0.1.m1.21184.m1cell division control protein 6 homologJBrowse
75398at6073Complete452.0219.0pspe_0.1.m1.52885.m1YEATS domain-containing protein 4JBrowse
75402at6073Complete852.6511.0pspe_0.1.m1.62640.m1pre-mRNA-processing factor 39JBrowse
75407at6073Complete821.4470.0pspe_0.1.m1.51920.m1SRSF protein kinase 1JBrowse
75410at6073Fragmented435.3290.0pspe_0.1.m1.32395.m1Zinc finger CCHC domain-containing 4JBrowse
75414at6073Complete385.5210.0pspe_0.1.m1.48408.m1charged multivesicular body protein 6JBrowse
75418at6073Complete1226.7749.0pspe_0.1.m1.21249.m1inactive rhomboid protein 1JBrowse
75422at6073Complete543.3315.0pspe_0.1.m1.62079.m1transmembrane protein 165JBrowse
75433at6073Fragmented891.0510.0pspe_0.1.m1.2349.m1sn1-specific diacylglycerol lipase alpha-likeJBrowse
75435at6073Complete280.3182.0pspe_0.1.m1.56848.m1HAUS augmin-like complex subunit 2JBrowse
75436at6073Complete985.0617.0pspe_0.1.m1.17585.m1solute carrier family 12 member 8JBrowse
75439at6073Complete625.8367.0pspe_0.1.m1.62097.m1tRNA (guanine(37)-N1)-methyltransferaseJBrowse
75443at6073Complete384.4254.0pspe_0.1.m1.42607.m1RNA-binding protein with multiple splicing-likeJBrowse
75444at6073Complete1074.2552.0pspe_0.1.m1.45199.m1IQ and ubiquitin-like domain-containingJBrowse
75445at6073Complete991.6614.0pspe_0.1.m1.14730.m1alpha-adducin-likeJBrowse
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