BUSCO Gene Details in Acropora gemmifera

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora gemmiferaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 78.8% [S: 65.8%, D: 13.0%] F: 12.3%, M: 8.9%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,524 (78.8%)2,109 (65.8%)415 (13.0%)395 (12.3%)284 (8.9%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora gemmifera: 3,444 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
4875at6073Fragmented269.5120.0agem_s0039.g47.t1mediator of RNA polymerase II transcription subunit 6JBrowse
4886at6073Complete418.4231.0agem_s0324.g22.t1exosome complex component rrp40JBrowse
4889at6073Complete404.3185.0agem_s0126.g29.t1GTP-binding protein SAR1b-likeJBrowse
4895at6073Duplicated207.5117.0agem_s0127.g55.t1proteasome maturation protein-likeJBrowse
4895at6073Duplicated207.2116.0agem_s0127.g55.t2proteasome maturation protein-likeJBrowse
4908at6073Complete461.3295.0agem_s0184.g20.t1lysophosphatidylserine lipase ABHD12-likeJBrowse
4922at6073Complete733.9389.0agem_s0032.g99.t1serine/threonine-protein kinase 32B-likeJBrowse
4936at6073Duplicated456.4222.0agem_s0062.g19.t2ATP-dependent Clp protease proteolytic subunit-likeJBrowse
4936at6073Duplicated455.4221.0agem_s0062.g19.t3ATP-dependent Clp protease proteolytic subunit-likeJBrowse
4958at6073Complete122.784.0agem_s0012.g21.t1cAMP-regulated phosphoprotein 19JBrowse
4963at6073Complete1181.9556.0agem_s0132.g21.t1methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-likeJBrowse
4972at6073Complete384.6224.0agem_s0200.g56.t1glyoxalase 3-likeJBrowse
5052at6073Complete1229.8650.0agem_s0063.g17.t1dipeptidyl peptidase 9JBrowse
5057at6073Complete401.8141.0agem_s0106.g108.t240S ribosomal protein S16JBrowse
5063at6073Complete621.9309.0agem_s0043.g65.t1mitoferrin-1JBrowse
5121at6073Complete368.0184.0agem_s0146.g36.t1GTP-binding protein RhebJBrowse
5127at6073Duplicated481.0269.0agem_s0005.g158.t1E3 ubiquitin-protein ligase CCNB1IP1-likeJBrowse
5127at6073Duplicated411.2243.0agem_s0005.g158.t2E3 ubiquitin-protein ligase CCNB1IP1-likeJBrowse
5132at6073Complete569.7353.0agem_s0125.g21.t1pleckstrin-2-likeJBrowse
5141at6073Complete1169.8574.0agem_s0055.g49.t1S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthaseJBrowse
Go to page: of 173 pages
TOP