BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
5141at6073Fragmented942.3436.0FUN_014494-T1S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthaseJBrowse
5181at6073Complete1061.3477.0FUN_001771-T1WD40 repeat-containing SMU1JBrowse
5187at6073Complete789.7395.0FUN_029328-T1lymphocyte expansion molecule-likeJBrowse
5223at6073Duplicated691.9430.0FUN_015262-T1inactive peptidyl-prolyl cis-trans isomerase FKBP6-likeJBrowse
5223at6073Duplicated625.3374.0FUN_015262-T2inactive peptidyl-prolyl cis-trans isomerase FKBP6-likeJBrowse
5224at6073Complete776.7447.0FUN_008617-T1calcium-independent phospholipase A2-gamma-likeJBrowse
5253at6073Complete1193.7829.0FUN_026909-T1GPI inositol-deacylase-likeJBrowse
5397at6073Complete273.3129.0FUN_037909-T140S ribosomal protein S15aJBrowse
5399at6073Complete206.5116.0FUN_016445-T1protein lin-52 homologJBrowse
5460at6073Complete440.3220.0FUN_033969-T1glutamine amidotransferase-like class 1 domain-containing 1JBrowse
5475at6073Complete320.9185.0FUN_026078-T1ATP synthase subunit C lysine N-methyltransferase-likeJBrowse
5506at6073Complete267.9168.0FUN_034721-T128S ribosomal protein S24, mitochondrialJBrowse
5527at6073Complete283.8156.0FUN_036115-T1protein SYS1 homologJBrowse
5560at6073Complete583.9361.0FUN_043651-T1snRNA-activating protein complex subunit 3JBrowse
5616at6073Complete362.7190.0FUN_009764-T1mitochondrial import inner membrane translocase subunit Tim23JBrowse
5670at6073Complete406.9230.0FUN_037080-T1MIT domain-containing protein 1JBrowse
5708at6073Complete652.9345.0FUN_037837-T1ATPase family AAA domain-containing 1JBrowse
5718at6073Complete2025.1964.0FUN_039817-T1Valine--tRNA ligaseJBrowse
5762at6073Complete546.7296.0FUN_038126-T1ribonuclease H2 subunit AJBrowse
5972at6073Complete235.1257.0FUN_007084-T1GRB2-associated-binding protein 1-likeJBrowse
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