BUSCO Gene Details in Scolanthus callimorphus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Scolanthus callimorphusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 74.0% [S: 60.0%, D: 14.1%] F: 14.8%, M: 11.2%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,371 (74.0%)1,921 (60.0%)450 (14.1%)473 (14.8%)359 (11.2%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Scolanthus callimorphus: 3,303 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
4936at6073Duplicated438.4215.0NY_Scal100_v1.5354.1ATP-dependent Clp protease proteolytic subunit-likeJBrowse
4958at6073Complete102.080.0NY_Scal100_v1.50262.1cAMP-regulated phosphoprotein 19JBrowse
4972at6073Duplicated305.1220.0NY_Scal100_v1.41080.1glyoxalase 3-likeJBrowse
4972at6073Duplicated302.5220.0NY_Scal100_v1.8419.1glyoxalase 3-likeJBrowse
5052at6073Fragmented1056.1605.0NY_Scal100_v1.34037.1dipeptidyl peptidase 9JBrowse
5057at6073Complete294.8141.0NY_Scal100_v1.49115.140S ribosomal protein S16JBrowse
5063at6073Duplicated592.5305.0NY_Scal100_v1.7319.1mitoferrin-1JBrowse
5063at6073Duplicated591.9305.0NY_Scal100_v1.7018.1mitoferrin-1JBrowse
5121at6073Complete348.5173.0NY_Scal100_v1.1708.1GTP-binding protein RhebJBrowse
5132at6073Complete423.3319.0NY_Scal100_v1.45001.1pleckstrin-2-likeJBrowse
5141at6073Fragmented536.3246.0NY_Scal100_v1.51421.1S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthaseJBrowse
5181at6073Complete978.8481.0NY_Scal100_v1.19578.1WD40 repeat-containing SMU1JBrowse
5187at6073Complete731.6392.0NY_Scal100_v1.36508.1lymphocyte expansion molecule-likeJBrowse
5223at6073Complete623.1426.0NY_Scal100_v1.25773.1inactive peptidyl-prolyl cis-trans isomerase FKBP6-likeJBrowse
5224at6073Fragmented337.5189.0NY_Scal100_v1.18266.1calcium-independent phospholipase A2-gamma-likeJBrowse
5397at6073Complete257.7127.0NY_Scal100_v1.4494.140S ribosomal protein S15aJBrowse
5399at6073Complete211.0116.0NY_Scal100_v1.19394.1protein lin-52 homologJBrowse
5460at6073Complete404.4217.0NY_Scal100_v1.35419.1glutamine amidotransferase-like class 1 domain-containing 1JBrowse
5474at6073Complete308.5189.0NY_Scal100_v1.45555.1U8 snoRNA-decapping enzyme-likeJBrowse
5475at6073Complete314.6183.0NY_Scal100_v1.1656.1ATP synthase subunit C lysine N-methyltransferase-likeJBrowse
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