BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75524at6073Complete353.1201.0pspe_0.1.m1.40555.m1nascent polypeptide-associated complex subunit alphaJBrowse
75525at6073Complete292.1210.0pspe_0.1.m1.14591.m1sugar transporter SWEET1-likeJBrowse
75533at6073Complete457.7287.0pspe_0.1.m1.20877.m1alpha-ketoglutarate-dependent dioxygenase alkB homolog 4JBrowse
75536at6073Complete1237.3741.0pspe_0.1.m1.2217.m1transcriptional repressor NF-X1-likeJBrowse
75542at6073Fragmented2713.7775.0pspe_0.1.m1.14464.m1protocadherin-like proteinJBrowse
75557at6073Duplicated1012.9587.0pspe_0.1.m1.57086.m1grainyhead-like protein 1 homologJBrowse
75557at6073Duplicated999.0587.0pspe_0.1.m1.67660.m1grainyhead-like protein 1 homologJBrowse
75561at6073Complete374.0214.0pspe_0.1.m1.47605.m1zinc finger CCHC domain-containing protein 24JBrowse
75562at6073Complete628.3328.0pspe_0.1.m1.42219.m1dnaJ homolog subfamily C member 25 homologJBrowse
75566at6073Complete1286.7719.0pspe_0.1.m1.42210.m1osmotic avoidance abnormal protein 3-likeJBrowse
75568at6073Complete1733.51042.0pspe_0.1.m1.7123.m1ubiquitin carboxyl-terminal hydrolase 47JBrowse
75569at6073Complete462.9288.0pspe_0.1.m1.28904.m1ATP-dependent (S)-NAD(P)H-hydrate dehydrataseJBrowse
75574at6073Complete949.2443.0pspe_0.1.m1.49506.m1protein CBFA2T3-likeJBrowse
75587at6073Complete617.1378.0pspe_0.1.m1.8294.m1nuclease EXOG, mitochondrialJBrowse
75598at6073Complete815.2482.0pspe_0.1.m1.43250.m1transcription factor CP2JBrowse
75599at6073Complete1027.1598.0pspe_0.1.m1.56551.m1rho-related BTB domain-containing protein 1JBrowse
75603at6073Complete461.3269.0pspe_0.1.m1.26186.m1LIM domain-binding protein 2JBrowse
75608at6073Complete664.9392.0pspe_0.1.m1.24183.m1rabenosyn-5JBrowse
75610at6073Complete312.7199.0pspe_0.1.m1.50776.m1protein-lysine methyltransferase METTL21D-likeJBrowse
75611at6073Fragmented856.3455.0pspe_0.1.m1.30173.m1dymeclin-likeJBrowse
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