BUSCO Gene Details in Acropora florida

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora floridaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 80.3% [S: 68.3%, D: 12.0%] F: 11.1%, M: 8.7%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,571 (80.3%)2,187 (68.3%)384 (12.0%)355 (11.1%)277 (8.7%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora florida: 3,400 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74446at6073Duplicated793.4480.0aflo_s0329.g6.t2PX domain-containing protein kinase-like proteinJBrowse
74455at6073Complete797.0474.0aflo_s0025.g10.t1tyrosine-protein kinase RYK-likeJBrowse
74457at6073Complete319.0170.0aflo_s0026.g114.t1tubulin polymerization-promoting protein family member 2JBrowse
74460at6073Complete582.8379.0aflo_s0133.g59.t1GTPase Era, mitochondrial-likeJBrowse
74463at6073Complete452.4257.0aflo_s0053.g20.t1inositol monophosphatase 1JBrowse
74464at6073Duplicated2184.21142.0aflo_s0240.g29.t1paired amphipathic helix protein Sin3a-likeJBrowse
74464at6073Duplicated2183.81142.0aflo_s0240.g29.t2paired amphipathic helix protein Sin3a-likeJBrowse
74466at6073Complete485.0266.0aflo_s0040.g9.t1protein MAK16 homologJBrowse
74468at6073Complete448.8258.0aflo_s0057.g36.t1SPRY domain-containing SOCS box protein 3JBrowse
74478at6073Fragmented498.7274.0aflo_s0291.g32.t1chitinase domain-containing protein 1JBrowse
74479at6073Complete578.8322.0aflo_s0061.g36.t1WD repeat-containing protein 54JBrowse
74480at6073Fragmented503.7306.0aflo_s0138.g11.t1Tetratricopeptide repeat protein 5JBrowse
74484at6073Complete974.7625.0aflo_s0349.g29.t1dihydroxyacetone phosphate acyltransferase-likeJBrowse
74487at6073Complete598.6372.0aflo_s0081.g56.t1inositol polyphosphate-5-phosphatase AJBrowse
74489at6073Complete2322.31243.0aflo_s0406.g17.t1son of sevenless homolog 1-likeJBrowse
74491at6073Duplicated735.4387.0aflo_s0003.g187.t1phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoformJBrowse
74491at6073Duplicated735.1386.0aflo_s0003.g187.t2phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoformJBrowse
74491at6073Duplicated721.6386.0aflo_s0003.g187.t3phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoformJBrowse
74498at6073Complete621.3361.0aflo_s0296.g11.t1mRNA cap guanine-N7 methyltransferaseJBrowse
74499at6073Complete612.4330.0aflo_s0013.g99.t1zinc metalloproteinase nas-6-likeJBrowse
Go to page: of 170 pages
TOP