BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74425at6073Duplicated830.0464.0aint_s0294.g22.t2Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complexJBrowse
74426at6073Duplicated1070.7639.0aint_s0110.g9.t1TBC1 domain family member 15JBrowse
74426at6073Duplicated1058.9638.0aint_s0110.g9.t2TBC1 domain family member 15JBrowse
74427at6073Complete1109.4715.0aint_s0448.g3.t1phosphatidylinositol polyphosphate 5-phosphatase type IV-likeJBrowse
74439at6073Complete818.4451.0aint_s0515.g2.t1cyclin AJBrowse
74446at6073Complete935.3531.0aint_s0160.g27.t1PX domain-containing protein kinase-like proteinJBrowse
74455at6073Complete798.2472.0aint_s0120.g14.t1tyrosine-protein kinase RYK-likeJBrowse
74457at6073Complete321.6170.0aint_s0182.g26.t1tubulin polymerization-promoting protein family member 2JBrowse
74460at6073Complete588.8379.0aint_s0245.g6.t1GTPase Era, mitochondrial-likeJBrowse
74463at6073Complete484.9283.0aint_s0020.g41.t1inositol monophosphatase 1JBrowse
74464at6073Duplicated2184.51142.0aint_s0037.g67.t2paired amphipathic helix protein Sin3a-likeJBrowse
74464at6073Duplicated2184.41142.0aint_s0037.g67.t1paired amphipathic helix protein Sin3a-likeJBrowse
74466at6073Fragmented328.8203.0aint_s0033.g31.t1protein MAK16 homologJBrowse
74468at6073Complete447.8258.0aint_s0101.g23.t1SPRY domain-containing SOCS box protein 3JBrowse
74471at6073Fragmented1192.3736.0aint_s0940.g1.t1structural maintenance of chromosomes protein 4JBrowse
74478at6073Complete660.1369.0aint_s0275.g6.t1chitinase domain-containing protein 1JBrowse
74479at6073Complete580.7322.0aint_s0017.g67.t1WD repeat-containing protein 54JBrowse
74480at6073Complete786.5427.0aint_s0004.g10.t1Tetratricopeptide repeat protein 5JBrowse
74484at6073Complete978.6625.0aint_s0146.g21.t1dihydroxyacetone phosphate acyltransferase-likeJBrowse
74486at6073Duplicated934.1602.0aint_s0034.g6.t1protein Smaug homolog 1JBrowse
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