BUSCO Gene Details in Haliclystus octoradiatus

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Haliclystus octoradiatusBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.5% [S: 71.4%, D: 2.1%] F: 9.2%, M: 17.3%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,355 (73.5%)2,287 (71.4%)68 (2.1%)294 (9.2%)554 (17.3%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Haliclystus octoradiatus: 2,721 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
77076at6073Complete900.6990BRAKERHOCP00005016290.1leucine-rich repeat and coiled-coil domain-containing protein 1JBrowse
77078at6073Complete530.8349BRAKERHOCP00005011814.1coiled-coil domain-containing protein 96JBrowse
77082at6073Fragmented186.4220BRAKERHOCP00005019751.1uncharacterized protein LOC116292340JBrowse
77087at6073Complete348.4381BRAKERHOCP00005001136.1DNA-directed RNA polymerase III subunit RPC4JBrowse
77088at6073Complete675.3786BRAKERHOCP00005013780.12 -5 -oligoadenylate synthase 1JBrowse
77089at6073Complete695.2746BRAKERHOCP00005014354.1X-linked retinitis pigmentosa GTPase regulator-likeJBrowse
77092at6073Complete359.4386BRAKERHOCP00005017624.1nucleotide exchange factor SIL1JBrowse
77093at6073Complete145.1175BRAKERHOCP00005017178.1tetratricopeptide repeat protein 33JBrowse
77095at6073Complete555.3407BRAKERHOCP00005020816.1DNA cross-link repair 1AJBrowse
77101at6073Fragmented292.1445BRAKERHOCP00005016510.1eukaryotic translation initiation factor 2-alpha kinase 1JBrowse
77103at6073Complete700.3710BRAKERHOCP00005001867.1ribonucleases P/MRP protein subunit POP1-likeJBrowse
77114at6073Complete720.3845BRAKERHOCP00005006023.1folliculin-interacting protein 1JBrowse
77115at6073Fragmented469.0399BRAKERHOCP00005008387.1DDB1- and CUL4-associated factor 5JBrowse
77134at6073Complete150.2107BRAKERHOCP00005002167.1nucleolar and coiled-body phosphoprotein 1JBrowse
77137at6073Complete401.1343BRAKERHOCP00005002822.1peroxisomal membrane protein PEX13-likeJBrowse
77148at6073Complete299.7549BRAKERHOCP00005018726.1kinetochore protein NDC80 homologJBrowse
77163at6073Complete287.1443BRAKERHOCP00005008781.1coiled-coil domain-containing protein 138JBrowse
77166at6073Complete383.8410BRAKERHOCP00005018852.1forkhead box protein J3-likeJBrowse
77171at6073Complete252.5252BRAKERHOCP00005000009.1transcriptional regulator Myc-1-likeJBrowse
77172at6073Complete296.1304BRAKERHOCP00005015947.1malonyl-CoA-acyl carrier protein transacylase, mitochondrialJBrowse
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