Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.
Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 77.6% [S: 74.9%, D: 2.7%] F: 11.7%, M: 10.6%
| Complete (C = S + D) | Single-copy (S) | Duplicated (D) | Fragmented (F) | Missing (M) |
|---|---|---|---|---|
| 2,487 (77.6%) | 2,400 (74.9%) | 87 (2.7%) | 376 (11.7%) | 340 (10.6%) |
A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.
Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.
| Busco ID | Status | Score | Length | Gene ID | Description | Visualization |
|---|---|---|---|---|---|---|
| 75846at6073 | Complete | 410.0 | 284 | BRAKERIOWP00000015704.1 | transmembrane protein 19 | JBrowse |
| 75851at6073 | Fragmented | 567.3 | 543 | BRAKERIOWP00000018293.1 | WD repeat-containing protein 91 | JBrowse |
| 75852at6073 | Complete | 643.8 | 487 | BRAKERIOWP00000015105.1 | anaphase-promoting complex subunit 7 | JBrowse |
| 75862at6073 | Fragmented | 409.4 | 353 | BRAKERIOWP00000013911.1 | F-box/LRR-repeat protein 5 | JBrowse |
| 75871at6073 | Complete | 1081.4 | 821 | BRAKERIOWP00000003096.1 | pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3-like | JBrowse |
| 75882at6073 | Complete | 650.1 | 393 | BRAKERIOWP00000007757.1 | membralin-like isoform X1 | JBrowse |
| 75888at6073 | Fragmented | 283.7 | 235 | BRAKERIOWP00000005646.1 | stAR-related lipid transfer protein 7, mitochondrial | JBrowse |
| 75900at6073 | Complete | 398.3 | 341 | BRAKERIOWP00000012178.1 | AAR2 homolog | JBrowse |
| 75908at6073 | Complete | 465.8 | 434 | BRAKERIOWP00000008702.1 | uncharacterized protein LOC116298666 | JBrowse |
| 75910at6073 | Complete | 173.7 | 133 | BRAKERIOWP00000007183.1 | Cytochrome c oxidase subunit | JBrowse |
| 75912at6073 | Complete | 506.9 | 333 | BRAKERIOWP00000011197.1 | E3 ubiquitin-protein ligase RING2-like | JBrowse |
| 75915at6073 | Complete | 599.9 | 450 | BRAKERIOWP00000008963.1 | phospholipase D3-like | JBrowse |
| 75916at6073 | Complete | 602.1 | 586 | BRAKERIOWP00000005697.1 | protein SERAC1-like | JBrowse |
| 75918at6073 | Complete | 609.1 | 499 | BRAKERIOWP00000005213.1 | cell division cycle 7-related protein kinase | JBrowse |
| 75937at6073 | Complete | 713.9 | 560 | BRAKERIOWP00000016535.1 | serine/threonine-protein kinase greatwall-like | JBrowse |
| 75940at6073 | Complete | 1044.5 | 831 | BRAKERIOWP00000002972.1 | exostosin-like 3 | JBrowse |
| 75949at6073 | Complete | 315.9 | 243 | BRAKERIOWP00000003120.1 | syntaxin-7-like | JBrowse |
| 75956at6073 | Complete | 389.3 | 350 | BRAKERIOWP00000011216.1 | Protein Wnt-6 | JBrowse |
| 75959at6073 | Complete | 512.9 | 375 | BRAKERIOWP00000015721.1 | Arginyl-tRNA--protein transferase 1 | JBrowse |
| 75962at6073 | Complete | 196.6 | 156 | BRAKERIOWP00000003460.1 | mediator of RNA polymerase II transcription subunit 19 | JBrowse |