BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75713at6073Fragmented1042.1632.0pspe_0.1.m1.51164.m1UHRF1-binding protein 1-likeJBrowse
75717at6073Complete302.3176.0pspe_0.1.m1.35719.m1ADP-ribosylation factor-like protein 2-binding proteinJBrowse
75721at6073Complete977.7739.0pspe_0.1.m1.46297.m1lutropin-choriogonadotropic hormone receptor-likeJBrowse
75723at6073Complete337.8196.0pspe_0.1.m1.56212.m1COMM domain-containing protein 10JBrowse
75730at6073Complete1331.0843.0pspe_0.1.m1.15214.m1Integrator complex subunit 7JBrowse
75733at6073Complete222.9153.0pspe_0.1.m1.64250.m1protein/nucleic acid deglycase DJ-1-likeJBrowse
75741at6073Fragmented687.5293.0pspe_0.1.m1.33716.m1inositol-trisphosphate 3-kinase AJBrowse
75746at6073Complete556.2354.0pspe_0.1.m1.65200.m1NSFL1 cofactor p47-likeJBrowse
75748at6073Complete720.1511.0pspe_0.1.m1.5794.m1vacuolar segregation protein PEP7JBrowse
75749at6073Complete506.8325.0pspe_0.1.m1.36411.m1stomatin-like protein 1JBrowse
75750at6073Complete1406.9911.0pspe_0.1.m1.57686.m1importin-13JBrowse
75765at6073Complete310.3258.0pspe_0.1.m1.37913.m1AnamorsinJBrowse
75777at6073Complete1162.1735.0pspe_0.1.m1.2461.m1TBC1 domain family member 12JBrowse
75783at6073Complete1934.41121.0pspe_0.1.m1.61786.m1Sister chromatid cohesion protein PDS5 AJBrowse
75790at6073Fragmented685.6338.0pspe_0.1.m1.62174.m1traB domain-containing proteinJBrowse
75793at6073Complete692.3410.0pspe_0.1.m1.36783.m1headcase proteinJBrowse
75797at6073Complete927.3527.0pspe_0.1.m1.62649.m1protein RFT1 homologJBrowse
75798at6073Complete1877.01189.0pspe_0.1.m1.26885.m1pleckstrin homology-like domain family B member 1JBrowse
75801at6073Duplicated684.2404.0pspe_0.1.m1.42376.m1rho GTPase-activating protein 44JBrowse
75801at6073Duplicated684.2404.0pspe_0.1.m1.69849.m1rho GTPase-activating protein 44JBrowse
Go to page: of 151 pages
TOP