BUSCO Gene Details in Turritopsis rubra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Turritopsis rubraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 77.6% [S: 74.9%, D: 2.7%] F: 11.7%, M: 10.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,487 (77.6%)2,400 (74.9%)87 (2.7%)376 (11.7%)340 (10.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Turritopsis rubra: 2,952 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75968at6073Complete1277.0818BRAKERIOWP00000000185.1helicase POLQ-likeJBrowse
75973at6073Complete605.9425BRAKERIOWP00000011411.1tRNA-dihydrouridine(20) synthaseJBrowse
75974at6073Complete873.6670BRAKERIOWP00000002602.1pseudouridine-metabolizing bifunctional protein C1861.05-likeJBrowse
75975at6073Complete653.2458BRAKERIOWP00000000709.1transmembrane protein 161B-likeJBrowse
75977at6073Complete563.0428BRAKERIOWP00000015138.1Epsin-2JBrowse
75985at6073Complete192.4170BRAKERIOWP00000001632.1EKC/KEOPS complex subunit Tprkb-likeJBrowse
75987at6073Complete582.3460BRAKERIOWP00000006482.1spartin-likeJBrowse
76002at6073Complete951.5695BRAKERIOWP00000005727.1E3 ubiquitin-protein ligase TRIM33-likeJBrowse
76005at6073Complete973.8883BRAKERIOWP00000013868.1Ribitol-5-phosphate transferase FKTN, N-terminalJBrowse
76009at6073Complete597.2650BRAKERIOWP00000010645.1E3 ubiquitin-protein ligase LRSAM1-likeJBrowse
76012at6073Complete826.7626BRAKERIOWP00000000140.1arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-likeJBrowse
76014at6073Complete918.8731BRAKERIOWP00000004206.1Progesterone-induced-blocking factor 1JBrowse
76027at6073Fragmented175.8140BRAKERIOWP00000008783.1acidic leucine-rich nuclear phosphoprotein 32 family member B-likeJBrowse
76028at6073Complete226.3203BRAKERIOWP00000007662.1bcl-2 homologous antagonist killerJBrowse
76032at6073Complete285.0250BRAKERIOWP00000006874.1AN1-type zinc finger protein 1JBrowse
76033at6073Complete718.4579BRAKERIOWP00000004041.1CyclinJBrowse
76034at6073Complete173.6160BRAKERIOWP00000000645.1protein LSM12 homologJBrowse
76036at6073Complete506.5379BRAKERIOWP00000009167.1chloroplast stem-loop binding of 41 kDa b, chloroplastic-likeJBrowse
76038at6073Complete294.8216BRAKERIOWP00000002510.1SNAREJBrowse
76040at6073Complete1109.2913BRAKERIOWP00000017689.1GPI ethanolamine phosphate transferase 1JBrowse
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