BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74555at6073Complete534.5294.0aint_s0501.g8.t1CDK-activating kinase assembly factor MAT1JBrowse
74562at6073Complete532.7306.0aint_s0040.g49.t1N-glycosylase/DNA lyase-likeJBrowse
74570at6073Complete960.6543.0aint_s0002.g171.t1general transcription factor IIH subunit 1JBrowse
74574at6073Complete1203.2593.0aint_s0048.g36.t1Cilia- and flagella-associated protein 91JBrowse
74575at6073Duplicated833.3483.0aint_s1519.g1.t1protein GPR107-like isoform X1JBrowse
74575at6073Duplicated737.3411.0aint_s0131.g23.t1protein GPR107-like isoform X1JBrowse
74578at6073Complete623.9388.0aint_s0308.g13.t1RNA-binding protein NOB1JBrowse
74586at6073Complete460.0249.0aint_s0199.g44.t1Copper chaperone for superoxide dismutaseJBrowse
74587at6073Complete705.8372.0aint_s0423.g10.t1coiled-coil domain-containing protein 113JBrowse
74589at6073Complete698.9384.0aint_s0176.g32.t1IQ domain-containing protein G-likeJBrowse
74590at6073Duplicated870.0475.0aint_s0051.g43.t1CUGBP Elav-like family member 3-AJBrowse
74590at6073Duplicated868.4475.0aint_s0051.g43.t2CUGBP Elav-like family member 3-AJBrowse
74591at6073Complete817.8499.0aint_s0332.g10.t1histone acetyltransferase KAT7-likeJBrowse
74595at6073Complete292.3160.0aint_s0019.g58.t1chromatin modification-related protein MEAF6-likeJBrowse
74597at6073Complete753.8417.0aint_s0079.g47.t1serine/threonine-protein kinase rio2-likeJBrowse
74598at6073Complete1359.4782.0aint_s0099.g104.t1elongator complex protein 2-likeJBrowse
74604at6073Fragmented375.2231.0aint_s0270.g6.t1uncharacterized protein LOC116308120JBrowse
74605at6073Complete634.1338.0aint_s0055.g62.t1Adenosine 3 -phospho 5 -phosphosulfate transporter 2JBrowse
74609at6073Fragmented909.8498.0aint_s0026.g16.t1beta-mannosidase-likeJBrowse
74611at6073Complete524.7299.0aint_s0307.g1.t1endoribonuclease LACTB2-likeJBrowse
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