BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75814at6073Fragmented423.5181.0pspe_0.1.m1.52919.m1transcriptional repressor protein YY1-likeJBrowse
75815at6073Duplicated352.5201.0pspe_0.1.m1.40355.m126S proteasome non-ATPase regulatory subunit 9JBrowse
75815at6073Duplicated352.2201.0pspe_0.1.m1.40339.m126S proteasome non-ATPase regulatory subunit 9JBrowse
75815at6073Duplicated351.0201.0pspe_0.1.m1.65826.m126S proteasome non-ATPase regulatory subunit 9JBrowse
75820at6073Complete561.0336.0pspe_0.1.m1.19935.m1heterogeneous nuclear ribonucleoprotein H3-likeJBrowse
75826at6073Complete326.9299.0pspe_0.1.m1.64348.m1inactive hydroxysteroid dehydrogenase-like protein 1JBrowse
75831at6073Complete663.7411.0pspe_0.1.m1.59773.m1tumor susceptibility gene 101 protein-likeJBrowse
75842at6073Fragmented141.590.0pspe_0.1.m1.41772.m1mediator of RNA polymerase II transcription subunit 21JBrowse
75846at6073Complete517.2290.0pspe_0.1.m1.70824.m1transmembrane protein 19JBrowse
75851at6073Complete1104.9686.0pspe_0.1.m1.2186.m1WD repeat-containing protein 91JBrowse
75852at6073Complete906.8516.0pspe_0.1.m1.44037.m1anaphase-promoting complex subunit 7JBrowse
75861at6073Complete405.8256.0pspe_0.1.m1.26721.m1pituitary homeobox 2-likeJBrowse
75862at6073Complete755.6482.0pspe_0.1.m1.9771.m1F-box/LRR-repeat protein 5JBrowse
75871at6073Complete1385.8821.0pspe_0.1.m1.46653.m1pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3-likeJBrowse
75882at6073Complete810.4435.0pspe_0.1.m1.45415.m1membralin-like isoform X1JBrowse
75888at6073Complete428.4293.0pspe_0.1.m1.16208.m1stAR-related lipid transfer protein 7, mitochondrialJBrowse
75900at6073Complete604.1351.0pspe_0.1.m1.67325.m1AAR2 homologJBrowse
75908at6073Complete730.3444.0pspe_0.1.m1.56480.m1uncharacterized protein LOC116298666JBrowse
75910at6073Complete231.0140.0pspe_0.1.m1.35728.m1Cytochrome c oxidase subunitJBrowse
75912at6073Complete628.5322.0pspe_0.1.m1.30775.m1E3 ubiquitin-protein ligase RING2-likeJBrowse
Go to page: of 151 pages
TOP