BUSCO Gene Details in Turritopsis rubra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Turritopsis rubraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 77.6% [S: 74.9%, D: 2.7%] F: 11.7%, M: 10.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,487 (77.6%)2,400 (74.9%)87 (2.7%)376 (11.7%)340 (10.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Turritopsis rubra: 2,952 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76041at6073Fragmented398.0277BRAKERIOWP00000002004.1protein O-mannose kinase-likeJBrowse
76042at6073Complete699.0466BRAKERIOWP00000001519.1potassium voltage-gated channel Shaw-likeJBrowse
76049at6073Complete411.0315BRAKERIOWP00000016812.1integral membrane protein GPR137B-likeJBrowse
76070at6073Complete403.9389BRAKERIOWP00000005969.1KH domain-containing, RNA-binding, signal transduction-associated protein 2JBrowse
76078at6073Complete219.4190BRAKERIOWP00000005330.1transmembrane protein 199JBrowse
76083at6073Complete374.1250BRAKERIOWP00000011550.1endonuclease V-likeJBrowse
76085at6073Complete229.4240BRAKERIOWP00000004889.1SynaptotagminJBrowse
76086at6073Complete374.9382BRAKERIOWP00000008598.1cyclic AMP-responsive element-binding protein 3-like protein 2JBrowse
76087at6073Complete288.5249BRAKERIOWP00000001251.1transformer-2 protein homolog beta-likeJBrowse
76096at6073Complete365.5285BRAKERIOWP00000011790.1zinc transporter ZIP1JBrowse
76101at6073Complete260.2175BRAKERIOWP00000011017.1Zinc finger Ran-binding domain-containing protein 2JBrowse
76104at6073Complete401.6278BRAKERIOWP00000012626.1dnaJ homolog subfamily C member 17JBrowse
76107at6073Fragmented95.695BRAKERIOWP00000017384.1coiled-coil domain-containing protein 189JBrowse
76113at6073Complete1397.31119BRAKERIOWP00000014139.1protein timeless homologJBrowse
76125at6073Complete545.0390BRAKERIOWP00000014160.1dynein assembly factor 4, axonemalJBrowse
76135at6073Complete644.1489BRAKERIOWP00000001917.1Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1JBrowse
76143at6073Complete529.1325BRAKERIOWP00000003371.1ubiquitin carboxyl-terminal hydrolase MINDY-1JBrowse
76155at6073Complete409.4312BRAKERIOWP00000000537.1O(6)-methylguanine-induced apoptosis 2JBrowse
76157at6073Fragmented643.4534BRAKERIOWP00000013394.1integrator complex subunit 6JBrowse
76158at6073Complete460.7312BRAKERIOWP00000014910.1putative RNA-binding protein Luc7-like 2JBrowse
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