BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74613at6073Complete1247.2675.0aint_s0308.g16.t1U4/U6 small nuclear ribonucleoprotein Prp3JBrowse
74615at6073Duplicated1043.5525.0aint_s0209.g12.t1caseinolytic peptidase B protein homologJBrowse
74615at6073Duplicated1036.8525.0aint_s0209.g12.t2caseinolytic peptidase B protein homologJBrowse
74621at6073Complete598.5331.0aint_s0121.g1.t1THO complex subunit 6JBrowse
74622at6073Fragmented525.0290.0aint_s0184.g36.t1BTB/POZ domain-containing protein 10JBrowse
74627at6073Duplicated606.1367.0aint_s0363.g3.t2early estrogen-induced gene 1 protein-likeJBrowse
74627at6073Duplicated558.5367.0aint_s0363.g3.t1early estrogen-induced gene 1 protein-likeJBrowse
74636at6073Fragmented619.1325.0aint_s0040.g39.t1dnaJ homolog subfamily C member 7JBrowse
74637at6073Fragmented257.7219.0aint_s0004.g71.t1Cleavage and polyadenylation specificity factor subunit 6JBrowse
74641at6073Complete468.4286.0aint_s0061.g51.t1uncharacterized protein LOC130641929 isoform X1JBrowse
74644at6073Complete584.5307.0aint_s0041.g18.t1transmembrane protein 231JBrowse
74645at6073Complete275.0158.0aint_s0075.g33.t1Calcium channel flowerJBrowse
74646at6073Fragmented450.0287.0aint_s0026.g52.t1rho GTPase-activating protein 24JBrowse
74647at6073Complete731.6431.0aint_s0071.g1.t1adenylyl cyclase-associated proteinJBrowse
74653at6073Complete623.6329.0aint_s0077.g42.t1Intraflagellar transport protein 46JBrowse
74655at6073Fragmented455.4293.0aint_s0037.g2.t1large subunit GTPase 1JBrowse
74657at6073Complete604.3322.0aint_s0203.g9.t1ribokinaseJBrowse
74666at6073Fragmented3911.32100.0aint_s0004.g112.t1ubiquitin carboxyl-terminal hydrolase 34JBrowse
74668at6073Complete654.1400.0aint_s0113.g31.t1dynactin subunit 2JBrowse
74670at6073Fragmented572.2335.0aint_s0227.g39.t1probable lysosomal cobalamin transporterJBrowse
Go to page: of 170 pages
TOP