BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74713at6073Complete1029.1554.0alor_g4887.t1poly(U)-binding-splicing factor PUF60-likeJBrowse
74716at6073Complete1218.6667.0alor_g16236.t1probable C-mannosyltransferase DPY19L3JBrowse
74731at6073Complete595.5364.0alor_g6488.t1alpha-taxilinJBrowse
74733at6073Complete599.2345.0alor_g9829.t1protein phosphatase methylesterase 1JBrowse
74735at6073Complete685.8370.0alor_g11917.t1phosphatidylinositol 4-phosphate 5-kinase type-1 alpha-likeJBrowse
74752at6073Complete914.8686.0alor_g24413.t1PHD finger protein 12JBrowse
74756at6073Complete548.7337.0alor_g25769.t1uncharacterized protein LOC114953848 isoform X1JBrowse
74758at6073Complete1838.51036.0alor_g17161.t1zinc finger SWIM domain-containing protein 5JBrowse
74759at6073Complete861.3499.0alor_g2608.t1uncharacterized protein LOC116289124JBrowse
74761at6073Fragmented286.2172.0alor_g23978.t1dehydrodolichyl diphosphate synthase complex subunit Nus1-likeJBrowse
74764at6073Complete1490.7555.0alor_g10173.t1GPI transamidase component PIG-TJBrowse
74772at6073Complete422.8336.0alor_g25195.t1Regulator of microtubule dynamicsJBrowse
74774at6073Complete170.397.0alor_g5478.t1AcylphosphataseJBrowse
74778at6073Complete508.0287.0alor_g21151.t1F-box only protein 8JBrowse
74780at6073Complete962.5585.0alor_g10303.t1Leucine-rich repeat-containing protein 40JBrowse
74786at6073Complete472.7256.0alor_g1771.t1type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphataseJBrowse
74787at6073Complete182.5105.0alor_g10238.t1DNA polymerase epsilon subunit 4JBrowse
74788at6073Duplicated578.6343.0alor_g6387.t1RAB6A-GEF complex partner protein 2JBrowse
74788at6073Duplicated578.5343.0alor_g6093.t1RAB6A-GEF complex partner protein 2JBrowse
74793at6073Complete557.4325.0alor_g23480.t1HIV Tat-specific factor 1JBrowse
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