BUSCO Gene Details in Acropora pulchra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora pulchraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 91.0% [S: 83.8%, D: 7.2%] F: 5.5%, M: 3.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,913 (91.0%)2,683 (83.8%)230 (7.2%)177 (5.5%)113 (3.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora pulchra: 3,349 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74774at6073Complete171.496.0FUN_016964-T1AcylphosphataseJBrowse
74778at6073Complete507.7287.0FUN_024399-T1F-box only protein 8JBrowse
74780at6073Complete963.0585.0FUN_029337-T1Leucine-rich repeat-containing protein 40JBrowse
74786at6073Complete472.7256.0FUN_034835-T1type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphataseJBrowse
74787at6073Complete182.5105.0FUN_004203-T1DNA polymerase epsilon subunit 4JBrowse
74788at6073Complete634.6388.0FUN_004718-T1RAB6A-GEF complex partner protein 2JBrowse
74790at6073Complete203.7133.0FUN_040152-T160S ribosomal protein L28-likeJBrowse
74793at6073Complete603.2350.0FUN_012546-T1HIV Tat-specific factor 1JBrowse
74796at6073Fragmented329.2228.0FUN_038809-T1diphthine methyltransferase-like isoform X1JBrowse
74797at6073Complete4066.02220.0FUN_031784-T1E3 ubiquitin-protein ligase HECTD1-likeJBrowse
74799at6073Complete700.5374.0FUN_014987-T13-methyl-2-oxobutanoate dehydrogenase JBrowse
74801at6073Complete432.9225.0FUN_033785-T1isopentenyl-diphosphate Delta-isomerase 1JBrowse
74802at6073Complete1837.11019.0FUN_015998-T1focal adhesion kinase 1-likeJBrowse
74829at6073Complete858.5422.0FUN_036212-T1Bardet-Biedl syndrome 4JBrowse
74838at6073Complete735.9444.0FUN_004848-T1tRNA:m(4)X modification enzyme TRM13 homologJBrowse
74839at6073Complete1035.2557.0FUN_001051-T1USP6 N-terminal-like proteinJBrowse
74842at6073Fragmented361.6198.0FUN_042644-T1WD repeat-containing 18JBrowse
74846at6073Complete867.3458.0FUN_012355-T1transmembrane protein 181-likeJBrowse
74851at6073Complete782.5422.0FUN_004225-T1serine/threonine-protein kinase NIM1-likeJBrowse
74852at6073Complete227.4133.0FUN_028495-T1mitochondrial fission 1 protein-likeJBrowse
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