BUSCO Gene Details in Acropora intermedia

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora intermediaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 81.0% [S: 69.2%, D: 11.8%] F: 10.6%, M: 8.4%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,594 (81.0%)2,215 (69.2%)379 (11.8%)340 (10.6%)269 (8.4%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora intermedia: 3,383 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74671at6073Complete743.0408.0aint_s0020.g105.t1selenocysteine lyase-likeJBrowse
74676at6073Complete759.9404.0aint_s0111.g20.t1elongation factor 1-gammaJBrowse
74677at6073Fragmented820.7563.0aint_s0032.g32.t1Centromere/kinetochore protein zw10JBrowse
74682at6073Complete982.6564.0aint_s0055.g126.t1amyloid protein-binding protein 2JBrowse
74684at6073Complete1278.8817.0aint_s0435.g2.t1histone-lysine N-methyltransferase 2C-likeJBrowse
74688at6073Complete866.6367.0aint_s0026.g85.t1Peptidyl-prolyl cis-trans isomerase DJBrowse
74697at6073Complete640.9390.0aint_s0055.g46.t1protein ABHD15-likeJBrowse
74699at6073Complete496.3277.0aint_s0036.g72.t1Uridine phosphorylase 1JBrowse
74707at6073Complete594.9380.0aint_s0095.g21.t1synaptotagmin-15JBrowse
74709at6073Complete744.4459.0aint_s0033.g43.t1alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-likeJBrowse
74713at6073Duplicated1029.4554.0aint_s0099.g43.t1poly(U)-binding-splicing factor PUF60-likeJBrowse
74713at6073Duplicated996.7526.0aint_s0099.g43.t2poly(U)-binding-splicing factor PUF60-likeJBrowse
74731at6073Complete598.4364.0aint_s0019.g65.t1alpha-taxilinJBrowse
74733at6073Fragmented309.8179.0aint_s0347.g22.t3protein phosphatase methylesterase 1JBrowse
74735at6073Fragmented426.4237.0aint_s0051.g89.t1phosphatidylinositol 4-phosphate 5-kinase type-1 alpha-likeJBrowse
74752at6073Duplicated1144.8760.0aint_s0054.g84.t2PHD finger protein 12JBrowse
74752at6073Duplicated1138.3760.0aint_s0054.g84.t1PHD finger protein 12JBrowse
74758at6073Complete1840.21036.0aint_s0174.g9.t1zinc finger SWIM domain-containing protein 5JBrowse
74759at6073Complete904.6456.0aint_s0321.g5.t1uncharacterized protein LOC116289124JBrowse
74761at6073Complete400.5251.0aint_s0046.g22.t1dehydrodolichyl diphosphate synthase complex subunit Nus1-likeJBrowse
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