BUSCO Gene Details in Acropora loripes

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Acropora loripesBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 89.5% [S: 82.8%, D: 6.7%] F: 6.9%, M: 3.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,868 (89.5%)2,652 (82.8%)216 (6.7%)221 (6.9%)114 (3.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Acropora loripes: 3,324 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
74796at6073Fragmented372.0230.0alor_g2431.t1diphthine methyltransferase-like isoform X1JBrowse
74797at6073Complete3928.12220.0alor_g26728.t1E3 ubiquitin-protein ligase HECTD1-likeJBrowse
74799at6073Complete701.2374.0alor_g24425.t13-methyl-2-oxobutanoate dehydrogenase JBrowse
74801at6073Complete434.3225.0alor_g2034.t1isopentenyl-diphosphate Delta-isomerase 1JBrowse
74802at6073Complete1806.61019.0alor_g25938.t1focal adhesion kinase 1-likeJBrowse
74803at6073Complete628.1381.0alor_g12702.t1calcium uptake protein 2, mitochondrial-likeJBrowse
74829at6073Complete859.0422.0alor_g12431.t1Bardet-Biedl syndrome 4JBrowse
74838at6073Complete632.1400.0alor_g23167.t1tRNA:m(4)X modification enzyme TRM13 homologJBrowse
74839at6073Complete1040.6560.0alor_g19719.t1USP6 N-terminal-like proteinJBrowse
74842at6073Complete653.8419.0alor_g6938.t1WD repeat-containing 18JBrowse
74846at6073Complete804.3458.0alor_g23944.t1transmembrane protein 181-likeJBrowse
74852at6073Complete227.2133.0alor_g14212.t1mitochondrial fission 1 protein-likeJBrowse
74854at6073Complete923.3550.0alor_g447.t1probable ATP-dependent RNA helicase ddx31JBrowse
74858at6073Complete1299.9946.0alor_g24498.t1MORC family CW-type zinc finger protein 2A-likeJBrowse
74860at6073Complete728.1417.0alor_g10122.t1TOM1-like protein 2JBrowse
74866at6073Complete638.2348.0alor_g12517.t15'-AMP-activated protein kinase subunit gamma-1-likeJBrowse
74868at6073Complete778.4406.0alor_g20446.t1oxysterol-binding protein 1JBrowse
74869at6073Complete436.7254.0alor_g7829.t1methyl-CpG-binding domain protein 2JBrowse
74873at6073Complete321.8170.0alor_g7538.t1transmembrane protein 208JBrowse
74874at6073Complete1794.1972.0alor_g20161.t1coiled-coil domain-containing protein 40JBrowse
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