BUSCO Gene Details in Hydra oligactis

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Hydra oligactisBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 73.2% [S: 66.0%, D: 7.2%] F: 13.3%, M: 13.5%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,344 (73.2%)2,115 (66.0%)229 (7.2%)427 (13.3%)432 (13.5%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Hydra oligactis: 3,025 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
75975at6073Complete605.6405.0HOLI01801.G4169transmembrane protein 161B-likeJBrowse
75977at6073Fragmented417.7212.0HOLI03838.G38565Epsin-2JBrowse
75985at6073Duplicated225.8172.0HOLI00610.G54179EKC/KEOPS complex subunit Tprkb-likeJBrowse
75985at6073Duplicated221.0172.0HOLI00242.G45721EKC/KEOPS complex subunit Tprkb-likeJBrowse
75987at6073Complete603.2468.0HOLI00497.G32295spartin-likeJBrowse
76002at6073Complete909.9671.0HOLI00079.G27513E3 ubiquitin-protein ligase TRIM33-likeJBrowse
76005at6073Complete1075.2883.0HOLI02797.G8312Ribitol-5-phosphate transferase FKTN, N-terminalJBrowse
76012at6073Complete873.9628.0HOLI00007.G39610arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3-likeJBrowse
76014at6073Complete1058.8767.0HOLI00518.G1720Progesterone-induced-blocking factor 1JBrowse
76027at6073Complete382.0240.0HOLI00501.G59154acidic leucine-rich nuclear phosphoprotein 32 family member B-likeJBrowse
76028at6073Duplicated265.6204.0HOLI02425.G54852bcl-2 homologous antagonist killerJBrowse
76028at6073Duplicated249.7177.0HOLI03062.G41849bcl-2 homologous antagonist killerJBrowse
76032at6073Complete249.3249.0HOLI00285.G2680AN1-type zinc finger protein 1JBrowse
76033at6073Complete823.0616.0HOLI02618.G38621CyclinJBrowse
76034at6073Complete183.7161.0HOLI00745.G16438protein LSM12 homologJBrowse
76036at6073Complete450.8353.0HOLI00038.G44313chloroplast stem-loop binding of 41 kDa b, chloroplastic-likeJBrowse
76038at6073Complete297.9213.0HOLI02904.G59576SNAREJBrowse
76040at6073Complete1237.7922.0HOLI00211.G58335GPI ethanolamine phosphate transferase 1JBrowse
76041at6073Complete417.4291.0HOLI00029.G34705protein O-mannose kinase-likeJBrowse
76042at6073Duplicated666.9474.0HOLI05201.G22907potassium voltage-gated channel Shaw-likeJBrowse
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