BUSCO Gene Details in Pachyseris speciosa

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Pachyseris speciosaBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 79.1% [S: 76.8%, D: 2.3%] F: 12.1%, M: 8.8%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,533 (79.1%)2,461 (76.8%)72 (2.3%)389 (12.1%)281 (8.8%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

BUSCO hits recorded for Pachyseris speciosa: 3,003 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76033at6073Complete943.1629.0pspe_0.1.m1.41647.m1CyclinJBrowse
76034at6073Complete240.4164.0pspe_0.1.m1.43809.m1protein LSM12 homologJBrowse
76038at6073Complete294.4189.0pspe_0.1.m1.70131.m1SNAREJBrowse
76040at6073Complete1619.6932.0pspe_0.1.m1.2224.m1GPI ethanolamine phosphate transferase 1JBrowse
76041at6073Complete615.7356.0pspe_0.1.m1.63717.m1protein O-mannose kinase-likeJBrowse
76042at6073Complete853.3469.0pspe_0.1.m1.52053.m1potassium voltage-gated channel Shaw-likeJBrowse
76047at6073Complete899.8532.0pspe_0.1.m1.50826.m1frizzled-4JBrowse
76049at6073Complete581.1375.0pspe_0.1.m1.38079.m1integral membrane protein GPR137B-likeJBrowse
76056at6073Complete300.6232.0pspe_0.1.m1.52462.m1high mobility group protein B3-likeJBrowse
76060at6073Complete312.0160.0pspe_0.1.m1.7982.m1acyl-CoA-binding domain-containing protein 2JBrowse
76070at6073Complete621.6392.0pspe_0.1.m1.23398.m1KH domain-containing, RNA-binding, signal transduction-associated protein 2JBrowse
76078at6073Complete270.9179.0pspe_0.1.m1.14471.m1transmembrane protein 199JBrowse
76083at6073Complete443.5250.0pspe_0.1.m1.47487.m1endonuclease V-likeJBrowse
76085at6073Complete364.1273.0pspe_0.1.m1.38569.m1SynaptotagminJBrowse
76086at6073Complete687.3423.0pspe_0.1.m1.2296.m1cyclic AMP-responsive element-binding protein 3-like protein 2JBrowse
76096at6073Duplicated456.7297.0pspe_0.1.m1.28695.m1zinc transporter ZIP1JBrowse
76096at6073Duplicated458.6296.0pspe_0.1.m1.28696.m1zinc transporter ZIP1JBrowse
76096at6073Duplicated436.8295.0pspe_0.1.m1.28700.m1zinc transporter ZIP1JBrowse
76101at6073Complete308.8182.0pspe_0.1.m1.13777.m1Zinc finger Ran-binding domain-containing protein 2JBrowse
76104at6073Fragmented296.5205.0pspe_0.1.m1.25242.m1dnaJ homolog subfamily C member 17JBrowse
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