BUSCO Gene Details in Turritopsis rubra

Detailed Benchmarking Universal Single-Copy Ortholog (BUSCO) analysis results for the selected species.

Genome completeness (BUSCO) Turritopsis rubraBelow quality threshold

Lineage cnidaria_odb12 · 3,203 BUSCOs · C: 77.6% [S: 74.9%, D: 2.7%] F: 11.7%, M: 10.6%

Single-copy complete (S)Duplicated (D)Fragmented (F)Missing (M)
Complete (C = S + D)Single-copy (S)Duplicated (D)Fragmented (F)Missing (M)
2,487 (77.6%)2,400 (74.9%)87 (2.7%)376 (11.7%)340 (10.6%)

A genome is counted as high-quality when C ≥ 90 %, D ≤ 10 % and F ≤ 5 %. Completeness is measured against the 3,203 BUSCOs of the cnidaria_odb12 lineage, not against the number of records held for the species.

Re-run on 2026-09-18 — these figures are comparable with the other species. In the original run, the protein set searched contained every protein twice — the same gene models are deposited under two naming schemes at once, a legacy one (IDs of the form g12345.t1) and a BRAKER one. Each BUSCO was therefore matched once under each name, at identical alignment score and length, and scored Duplicated, which is the signature of one sequence being counted twice rather than of a real gene duplication. BUSCO was re-run for this species on a de-duplicated set holding one sequence per gene locus, and the figures above come from that run. The original near-zero single-copy fraction was an artefact of the redundancy in the searched set, not a property of the assembly.

BUSCO hits recorded for Turritopsis rubra: 2,952 (one row per gene hit, not per BUSCO)
Show: genes per page
Busco ID Status Score Length Gene ID Description Visualization
76265at6073Complete450.3357BRAKERIOWP00000002658.1zinc finger CCCH domain-containing protein 15JBrowse
76271at6073Complete763.9537BRAKERIOWP00000011196.1DNA polymerase etaJBrowse
76286at6073Complete463.8427BRAKERIOWP00000012400.1AP-5 complex subunit mu-1JBrowse
76291at6073Fragmented643.2480BRAKERIOWP00000015459.1peroxisomal targeting signal 1 receptor-likeJBrowse
76298at6073Complete715.8676BRAKERIOWP00000011854.1zinc finger and BTB domain-containing protein 24-likeJBrowse
76299at6073Complete1405.31185BRAKERIOWP00000010583.1DNA topoisomerase 2-binding protein 1JBrowse
76306at6073Complete620.4652BRAKERIOWP00000010956.1terminal nucleotidyltransferase 4B-likeJBrowse
76315at6073Fragmented301.5376BRAKERIOWP00000000107.1transmembrane protein 214-AJBrowse
76320at6073Complete771.2624BRAKERIOWP00000003186.1centrosomal protein of 83 kDa-likeJBrowse
76327at6073Complete357.5283BRAKERIOWP00000005923.1coiled-coil domain-containing protein 166JBrowse
76329at6073Complete1541.71102BRAKERIOWP00000010481.1F-actin-methionine sulfoxide oxidase MICAL2-likeJBrowse
76343at6073Complete480.8380BRAKERIOWP00000004728.1F-box only protein 30JBrowse
76345at6073Complete331.5281BRAKERIOWP00000003997.1ribonuclease H2 subunit BJBrowse
76350at6073Complete338.3278BRAKERIOWP00000019417.1STAGA complex 65 subunit gamma-likeJBrowse
76351at6073Complete371.1273BRAKERIOWP00000004469.1heterogeneous nuclear ribonucleoprotein KJBrowse
76363at6073Complete233.8227BRAKERIOWP00000011157.1Synaptosomal-associated proteinJBrowse
76365at6073Duplicated449.9383BRAKERIOWP00000008321.1palmitoleoyl-protein carboxylesterase notum1a-likeJBrowse
76365at6073Duplicated446.5372BRAKERIOWP00000008328.1palmitoleoyl-protein carboxylesterase notum1a-likeJBrowse
76393at6073Complete414.9315BRAKERIOWP00000012895.1testis-expressed protein 9JBrowse
76398at6073Complete947.4742BRAKERIOWP00000001130.1S1 RNA-binding domain-containing protein 1JBrowse
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